Miyakogusa Predicted Gene
- Lj4g3v0338180.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0338180.1 Non Chatacterized Hit- tr|I1MDV2|I1MDV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8589
PE=,90.78,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; no
description,WD40/YVTN ,CUFF.46947.1
(1035 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71932 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 1259 0.0
gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 377 e-103
gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 270 2e-71
gnl|LJGI|BW632626 similar to UniRef100_A7Q6X6 Cluster: Chromosom... 107 1e-22
gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like ... 96 5e-19
>gnl|LJGI|TC71932 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 755
Score = 1259 bits (635), Expect = 0.0
Identities = 635/635 (100%)
Strand = Plus / Plus
Query: 1 atgtcgactttcttatcaaacaccaatcaaaaccctaacaaatccttcgaggtgaatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtcgactttcttatcaaacaccaatcaaaaccctaacaaatccttcgaggtgaatcag 180
Query: 61 cctccgtctgattctgtctccagtctctgtttcagccccaaagctaacctcctcgtcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctccgtctgattctgtctccagtctctgtttcagccccaaagctaacctcctcgtcgcc 240
Query: 121 acttcctgggacaaccaggttcgatgctgggaagttgctcgcaatgttgccactgccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acttcctgggacaaccaggttcgatgctgggaagttgctcgcaatgttgccactgccccc 300
Query: 181 aaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggcacc 360
Query: 241 actgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctggagga 420
Query: 301 caaccgatgactgtcgccatgcacgatgcacccgttaaagacattgcttggattcctgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caaccgatgactgtcgccatgcacgatgcacccgttaaagacattgcttggattcctgag 480
Query: 361 atgagccttttagtcacaggaagctgggacaggactatcaagtattgggatactaggcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgagccttttagtcacaggaagctgggacaggactatcaagtattgggatactaggcag 540
Query: 421 ccaaatccagtgcatacacaacaactcccagagcgctgctatgcaatgtcagttaaacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccaaatccagtgcatacacaacaactcccagagcgctgctatgcaatgtcagttaaacat 600
Query: 481 cctctgatggttgttggcacagctgatagaaatatcttggtctacaacttgcaaaatcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cctctgatggttgttggcacagctgatagaaatatcttggtctacaacttgcaaaatcct 660
Query: 541 caggttgaattcaagagaatcatttcacctttaaagtatcagacaaggtgtctcgctgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caggttgaattcaagagaatcatttcacctttaaagtatcagacaaggtgtctcgctgca 720
Query: 601 ttccctgaccaacaaggtttcttggttggatcaat 635
|||||||||||||||||||||||||||||||||||
Sbjct: 721 ttccctgaccaacaaggtttcttggttggatcaat 755
>gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1439
Score = 377 bits (190), Expect = e-103
Identities = 752/939 (80%), Gaps = 9/939 (0%)
Strand = Plus / Plus
Query: 69 tgattctgtctccagtctctgtttcagccccaaagctaacctcctcgtcgccacttcctg 128
||||||| | || |||||||||||||| |||||||| || |||||||||| ||||| ||
Sbjct: 150 tgattctatttcgagtctctgtttcagtcccaaagccaatttcctcgtcgctacttcatg 209
Query: 129 ggacaaccaggttcgatgctgggaagttgc------tcgcaatgttgcca---ctgcccc 179
|||||| |||||||| |||||||| || | | | |||||| || || | ||
Sbjct: 210 ggacaatcaggttcggtgctgggagatttcaaggaatgggaatgttatcaatactactcc 269
Query: 180 caaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggcac 239
||| ||||| || |||||||| ||||| ||| |||| |||||||||||||| || || ||
Sbjct: 270 caaggcttcaatttctcatgaacaaccagttttgtgctctgcttggaaggatgatggaac 329
Query: 240 cactgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctggagg 299
|| || || || || || ||||||||||| |||||||||||||| || ||||| || ||
Sbjct: 330 aacagttttttctggaggctgtgacaagcaggtcaagatgtggccgcttttgtccggtgg 389
Query: 300 acaaccgatgactgtcgccatgcacgatgcacccgttaaagacattgcttggattcctga 359
||||||||||||||| || ||||| ||||| ||| |||| || | || ||||| || ||
Sbjct: 390 acaaccgatgactgttgctatgcatgatgctcccattaaggatctcgcgtggataccgga 449
Query: 360 gatgagccttttagtcacaggaagctgggacaggactatcaagtattgggatactaggca 419
| ||| |||||||| ||||||||| ||||||| || | ||||||||||||||||||||
Sbjct: 450 gttgaaccttttagccacaggaagttgggacaaaaccctgaagtattgggatactaggca 509
Query: 420 gccaaatccagtgcatacacaacaactcccagagcgctgctatgcaatgtcagttaaaca 479
| | ||||||||||| || ||||||||||| || || || |||||||| ||||| |||||
Sbjct: 510 gtccaatccagtgcacactcaacaactccctgatcgttgttatgcaatttcagtgaaaca 569
Query: 480 tcctctgatggttgttggcacagctgatagaaatatcttggtctacaacttgcaaaatcc 539
||||||||||||||| | || || ||||||||| | | |||| ||||||||| |||||
Sbjct: 570 tcctctgatggttgtggcaactgccgatagaaatcttattgtcttcaacttgcagaatcc 629
Query: 540 tcaggttgaattcaagagaatcatttcacctttaaagtatcagacaaggtgtctcgctgc 599
|||| ||| | ||| |||||| || || | |||||||||||||| ||| | |||||
Sbjct: 630 tcagactgagtacaaaagaatcgcatctcccctgaagtatcagacaagatgtgttgctgc 689
Query: 600 attccctgaccaacaaggtttcttggttggatcaatagaaggaagagttggggtacatca 659
|| | ||||| ||||| || |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 690 ctttcaagaccagcaaggatttttggttggctcaatagaaggaagggttggagtacatca 749
Query: 660 tttggatgatagtcagcagggtaaaaatttcacttttaaatgccacagagaggggaatga 719
|||||||| | || || || ||||| |||||||||||||| ||||| |||||
Sbjct: 750 cctggatgatggacaacaaaacaagaattttacttttaaatgccatagagaaaataatga 809
Query: 720 aatatattcagtcaactctttaaacttccatcctgtacaccacacctttgcaactgctgg 779
||||| || || ||||| ||||| |||||||| ||| | ||||| ||||||||||||||
Sbjct: 810 catatactctgtgaactccttaaatttccatccggtatatcacacttttgcaactgctgg 869
Query: 780 ttctgatggtgcttttaatttttgggacaaagatagtaaacagaggcttaaggccatgtt 839
||||||||||||| |||||| ||||| || || ||||||||||| || ||||| |||
Sbjct: 870 atctgatggtgcttataatttctgggataaggacagtaaacagagactcaaggctatggc 929
Query: 840 aagatgcagccaacctattccttgcagtgcattcaacaatgatggctcaatatttgctta 899
||| || | || || || ||||||||||||||||| | |||||| || |||| ||||||
Sbjct: 930 aaggtgtaatcagcccataccttgcagtgcattcaatagtgatggttccatatatgctta 989
Query: 900 ctcagtctgctatgactggagtaaaggggcagaaaatcataatcccacaacagcaaaaac 959
| || || ||||| ||||| ||||| ||||||||||| ||||| || |||||||| |
Sbjct: 990 tgcggtttgttatgattggagcaaaggagcagaaaatcacaatccaactacagcaaagag 1049
Query: 960 caacatttacctgcacttgccacaggagtctgaggttaa 998
|||||||| ||||||| || ||||| ||||||||||
Sbjct: 1050 caacatttttttgcacttacctcaggaaactgaggttaa 1088
>gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 827
Score = 270 bits (136), Expect = 2e-71
Identities = 403/492 (81%)
Strand = Plus / Plus
Query: 178 cccaaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggc 237
||||| ||||| || |||||||| ||||| ||| |||| |||||||||||||| || ||
Sbjct: 312 cccaaggcttcaatttctcatgaccaaccagttttgtgctctgcttggaaggatgatgga 371
Query: 238 accactgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctgga 297
|| || || ||||| || || ||||||||||| |||||||||||||| || ||||| ||
Sbjct: 372 acaacagttttctctggaggctgtgacaagcaggtcaagatgtggccgcttttgtcgggt 431
Query: 298 ggacaaccgatgactgtcgccatgcacgatgcacccgttaaagacattgcttggattcct 357
|||||||| ||||||| |||||||| ||||| || ||||||| |||| ||||| ||
Sbjct: 432 ggacaaccagtgactgttgccatgcatgatgctcctattaaagatcttgcgtggataccg 491
Query: 358 gagatgagccttttagtcacaggaagctgggacaggactatcaagtattgggatactagg 417
|| || |||||||||| ||| ||||| ||||||| || | ||||||||||||||||||
Sbjct: 492 gaaattagccttttagccaccggaagttgggacaaaaccgtgaagtattgggatactagg 551
Query: 418 cagccaaatccagtgcatacacaacaactcccagagcgctgctatgcaatgtcagttaaa 477
||| | ||||||||||| || ||||||||||| || ||||| |||||||| ||||| ||
Sbjct: 552 cagtccaatccagtgcacactcaacaactccctgatcgctgttatgcaatttcagtgaag 611
Query: 478 catcctctgatggttgttggcacagctgatagaaatatcttggtctacaacttgcaaaat 537
||||||||||||||||| || || |||||||||||| | | |||| ||||||||| |||
Sbjct: 612 catcctctgatggttgtggggactgctgatagaaatcttgttgtcttcaacttgcagaat 671
Query: 538 cctcaggttgaattcaagagaatcatttcacctttaaagtatcagacaaggtgtctcgct 597
|||||| ||| | ||| ||||| | || || | |||||||||||||| ||| | |||
Sbjct: 672 cctcagactgagtacaaaagaattgtatctcccctgaagtatcagacaagatgtgttgct 731
Query: 598 gcattccctgaccaacaaggtttcttggttggatcaatagaaggaagagttggggtacat 657
|| || || || || |||||||| ||||||| |||||||||||||| ||||| ||||||
Sbjct: 732 gcttttccagatcagcaaggttttctggttggttcaatagaaggaagggttggagtacat 791
Query: 658 catttggatgat 669
|| ||||||||
Sbjct: 792 cacctggatgat 803
>gnl|LJGI|BW632626 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 476
Score = 107 bits (54), Expect = 1e-22
Identities = 223/279 (79%), Gaps = 9/279 (3%)
Strand = Plus / Plus
Query: 69 tgattctgtctccagtctctgtttcagccccaaagctaacctcctcgtcgccacttcctg 128
||||||| | || |||||||||||||| |||||||| || |||||||||| ||||| ||
Sbjct: 180 tgattctatttcgagtctctgtttcagtcccaaagccaatttcctcgtcgctacttcatg 239
Query: 129 ggacaaccaggttcgatgctgggaagttgc------tcgcaatgttgcca---ctgcccc 179
|||||| |||||||| |||||||| || | | | |||||| || || | ||
Sbjct: 240 ggacaatcaggttcggtgctgggagatttcaaggaatgggaatgttatcaatactactcc 299
Query: 180 caaagcttccatctctcatgatcaaccggttctgtgttctgcttggaaggacgacggcac 239
||| ||||| || |||||||| ||||| ||| |||| |||||||||||||| || || ||
Sbjct: 300 caaggcttcaatttctcatgaacaaccagttttgtgctctgcttggaaggatgatggaac 359
Query: 240 cactgtcttctccggtggatgtgacaagcaagtcaagatgtggcctctcttgtctggagg 299
|| || || || || || ||||||||||| |||||||||||||| || ||||| || ||
Sbjct: 360 aacagttttttctggaggctgtgacaagcaggtcaagatgtggccgcttttgtccggtgg 419
Query: 300 acaaccgatgactgtcgccatgcacgatgcacccgttaa 338
||||||||||||||| || ||||| ||||| ||| ||||
Sbjct: 420 acaaccgatgactgttgctatgcatgatgctcccattaa 458
>gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like protein At1g80670;
n=2; Arabidopsis thaliana|Rep: Rae1-like protein
At1g80670 - Arabidopsis thaliana (Mouse-ear cress),
partial (19%)
Length = 745
Score = 95.6 bits (48), Expect = 5e-19
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 859 ccttgcagtgcattcaacaatgatggctcaatatttgcttactcagtctgctatgactgg 918
||||||||||||||||| |||||||| || |||| |||||| | || || ||||| |||
Sbjct: 23 ccttgcagtgcattcaataatgatggttccatatatgcttatgcggtttgttatgattgg 82
Query: 919 agtaaaggggcagaaaatcataatcccacaacagcaaaaaccaacatttacctgcacttg 978
|| ||||| ||||||||||| ||||| | |||||||| |||||||||| |||||||
Sbjct: 83 agcaaaggagcagaaaatcacaatccagctacagcaaagaccaacatttttttgcactta 142
Query: 979 ccacaggagtctgaggttaa 998
|| ||||| |||||||||||
Sbjct: 143 cctcaggaatctgaggttaa 162