Miyakogusa Predicted Gene
- Lj4g3v0338120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0338120.1 NODE_12853_length_1004_cov_109.649399.path1.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68728 similar to UniRef100_A7L4A8 Cluster: Somatic em... 755 0.0
gnl|LJGI|AV417583 similar to UniRef100_Q93W70 Cluster: SERK1 pro... 408 e-113
gnl|LJGI|AW720411 similar to UniRef100_Q94F62 Cluster: BRASSINOS... 394 e-109
gnl|LJGI|TC67584 homologue to UniRef100_Q8GRK2 Cluster: Somatic ... 103 1e-21
gnl|LJGI|FS331996 homologue to UniRef100_Q8GRK2 Cluster: Somatic... 54 1e-06
gnl|LJGI|TC59163 homologue to UniRef100_Q8GRK2 Cluster: Somatic ... 54 1e-06
>gnl|LJGI|TC68728 similar to UniRef100_A7L4A8 Cluster: Somatic embryogenesis receptor
kinase; n=1; Carica papaya|Rep: Somatic embryogenesis
receptor kinase - Carica papaya (Papaya), partial (80%)
Length = 2038
Score = 755 bits (381), Expect = 0.0
Identities = 388/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 236 gaaatgcagacctttctggtcagctggttccacaacttggtcagctctcaaatttgcagt 295
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 gaaatgcagacctttctggtcagctggt-ccacaacttggtcagctctcaaatttgcagt 59
Query: 296 acttggaactttatagtaataatatgactggaaaaattccagatgagcttggaaatttga 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 acttggaactttatagtaataatatgactggaaaaattccagatgagcttggaaatttga 119
Query: 356 caaacttggtgagcttggatctttacttgaacaatttaactggaaacataccgagtacat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caaacttggtgagcttggatctttacttgaacaatttaactggaaacataccgagtacat 179
Query: 416 tgggcaaccttggtaaactacgtttcctgcgtctcaataataatactttgtctggaggca 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgggcaaccttggtaaactacgtttcctgcgtctcaataataatactttgtctggaggca 239
Query: 476 ttcccatgactttgacaaatgtttcttcactgcaagttcttgatctctcaaacaaccaac 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttcccatgactttgacaaatgtttcttcactgcaagttcttgatctctcaaacaaccaac 299
Query: 536 taaaaggggttgtccctgtgaacggttcattttcattgtttacccccatcagttatcaaa 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taaaaggggttgtccctgtgaacggttcattttcattgtttacccccatcagttatcaaa 359
Query: 596 ataatcctggcctaatacaaccaaaaaac 624
|||||||||||||||||||||||||||||
Sbjct: 360 ataatcctggcctaatacaaccaaaaaac 388
>gnl|LJGI|AV417583 similar to UniRef100_Q93W70 Cluster: SERK1 protein precursor; n=1;
Zea mays|Rep: SERK1 protein precursor - Zea mays
(Maize), partial (12%)
Length = 250
Score = 408 bits (206), Expect = e-113
Identities = 245/262 (93%), Gaps = 16/262 (6%)
Strand = Plus / Plus
Query: 363 ggtgagcttggatctttacttgaacaatttaactggaaacataccgagtacattgggcaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggtgagcttggatctttacttgaacaatttaactggaaacataccgagtacattgggcaa 62
Query: 423 ccttggtaaactacgtttcctgcgtctcaataataatactttgtctggaggcattcccat 482
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccttgg----------------cgtctcaataataatactttgtctggaggcattcccat 106
Query: 483 gactttgacaaatgtttcttcactgcaagttcttgatctctcaaacaaccaactaaaagg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gactttgacaaatgtttcttcactgcaagttcttgatctctcaaacaaccaactaaaagg 166
Query: 543 ggttgtccctgtgaacggttcattttcattgtttacccccatcagttatcaaaataatcc 602
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 167 ggttgtccctgtgaacggttcattntcattgtttacccccatcagttatcaaaataatcc 226
Query: 603 tggcctaatacaaccaaaaaac 624
||||||||||||||||||||||
Sbjct: 227 tggcctaatacaaccaaaaaac 248
>gnl|LJGI|AW720411 similar to UniRef100_Q94F62 Cluster: BRASSINOSTEROID INSENSITIVE
1-associated receptor kinase 1 precursor; n=1;
Arabidopsis thaliana|Rep: BRASSINOSTEROID INSENSITIVE
1-associated receptor kinase 1 precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 574
Score = 394 bits (199), Expect = e-109
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 1 atggagagagtgaattcatcttctaaggcttcatttcttgtttgggcaattattgtgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atggagagagtgaattcatcttctaaggcttcatttcttgtttgggcaattattgtgctt 435
Query: 61 gatttggtgcttaaggcttctggcaatgctgaaggtgatgccctcaatgcattgaaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gatttggtgcttaaggcttctggcaatgctgaaggtgatgccctcaatgcattgaaaagc 495
Query: 121 aacttgaatgatcctaacaacgttcttcaaagttgggatgctacccttgtcaatccctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aacttgaatgatcctaacaacgttcttcaaagttgggatgctacccttgtcaatccctgc 555
Query: 181 acatggtttcatgttacat 199
|||||||||||||||||||
Sbjct: 556 acatggtttcatgttacat 574
>gnl|LJGI|TC67584 homologue to UniRef100_Q8GRK2 Cluster: Somatic embryogenesis
receptor kinase 1; n=1; Medicago truncatula|Rep: Somatic
embryogenesis receptor kinase 1 - Medicago truncatula
(Barrel medic), partial (19%)
Length = 790
Score = 103 bits (52), Expect = 1e-21
Identities = 154/188 (81%)
Strand = Plus / Plus
Query: 130 gatcctaacaacgttcttcaaagttgggatgctacccttgtcaatccctgcacatggttt 189
||||||||||| ||| | |||||||||||| |||| ||||||||||| ||||||||||||
Sbjct: 549 gatcctaacaatgttttgcaaagttgggatcctacacttgtcaatccatgcacatggttt 608
Query: 190 catgttacatgcaatggtgataacagtgtgacccgtgttgatcttggaaatgcagacctt 249
||||| |||||||| |||||||||||| | | |||||| | |||||||| | |
Sbjct: 609 catgtaacatgcaacaatgataacagtgtcataagagttgatttgggaaatgctgctttg 668
Query: 250 tctggtcagctggttccacaacttggtcagctctcaaatttgcagtacttggaactttat 309
|||||||| || ||| |||| ||||| || ||| ||||||||||| |||||||||||
Sbjct: 669 tctggtcaacttgtttcacagcttggccaactcaagaatttgcagtatttggaactttac 728
Query: 310 agtaataa 317
|| |||||
Sbjct: 729 agcaataa 736
>gnl|LJGI|FS331996 homologue to UniRef100_Q8GRK2 Cluster: Somatic embryogenesis
receptor kinase 1; n=1; Medicago truncatula|Rep: Somatic
embryogenesis receptor kinase 1 - Medicago truncatula
(Barrel medic), partial (14%)
Length = 690
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 133 cctaacaacgttcttcaaagttgggatgctacccttgtcaatccctgcacatggtttcat 192
|||||||| ||| | ||||||||||| |||| || |||||||| || || |||||||||
Sbjct: 491 cctaacaatgttttgcaaagttgggaccctacactggtcaatccatgtacgtggtttcat 550
Query: 193 gttacatgcaa 203
|| ||||||||
Sbjct: 551 gtaacatgcaa 561
>gnl|LJGI|TC59163 homologue to UniRef100_Q8GRK2 Cluster: Somatic embryogenesis
receptor kinase 1; n=1; Medicago truncatula|Rep: Somatic
embryogenesis receptor kinase 1 - Medicago truncatula
(Barrel medic), partial (25%)
Length = 852
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 133 cctaacaacgttcttcaaagttgggatgctacccttgtcaatccctgcacatggtttcat 192
|||||||| ||| | ||||||||||| |||| || |||||||| || || |||||||||
Sbjct: 446 cctaacaatgttttgcaaagttgggaccctacactggtcaatccatgtacgtggtttcat 505
Query: 193 gttacatgcaa 203
|| ||||||||
Sbjct: 506 gtaacatgcaa 516