Miyakogusa Predicted Gene
- Lj4g3v0336850.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0336850.3 Non Chatacterized Hit- tr|C5LMD1|C5LMD1_PERM5
Interferon-induced GTP-binding protein Mx, putative
OS,31.77,8e-18,Dynamin, GTPase,Dynamin, GTPase domain;
DYNAMIN,Dynamin; P-loop containing nucleoside triphosphate
h,CUFF.46925.3
(1587 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59026 similar to UniRef100_A7Q6T0 Cluster: Chromosome... 894 0.0
gnl|LJGI|DC596940 homologue to UniRef100_A7Q6T0 Cluster: Chromos... 500 e-140
gnl|LJGI|FS336972 similar to UniRef100_A7Q6T0 Cluster: Chromosom... 488 e-137
>gnl|LJGI|TC59026 similar to UniRef100_A7Q6T0 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 789
Score = 894 bits (451), Expect = 0.0
Identities = 451/451 (100%)
Strand = Plus / Plus
Query: 308 aaatccaggcatacattgaagctgagaatgcgaggttggagcgtgacagttgtcaattct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aaatccaggcatacattgaagctgagaatgcgaggttggagcgtgacagttgtcaattct 398
Query: 368 ccgcgaaggagataattatcaaggtggagtacaagtactgccctaatctgacaattatcg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccgcgaaggagataattatcaaggtggagtacaagtactgccctaatctgacaattatcg 458
Query: 428 acacgcctgggctcatcgcgcctgctccggggagaaagaatcgagcactgcaggcgcagg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acacgcctgggctcatcgcgcctgctccggggagaaagaatcgagcactgcaggcgcagg 518
Query: 488 gccgggcggttgagtctctagtccgggctaagatgcagcacaaggagtttattatactct 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gccgggcggttgagtctctagtccgggctaagatgcagcacaaggagtttattatactct 578
Query: 548 gccttgaagattgcagtgattggagcaatgcaactacaaggcgtgttgtcatgcagattg 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gccttgaagattgcagtgattggagcaatgcaactacaaggcgtgttgtcatgcagattg 638
Query: 608 atcctgagttgtcgaggacggttgttgtatcgactaagctggataccaggataccgcaat 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 atcctgagttgtcgaggacggttgttgtatcgactaagctggataccaggataccgcaat 698
Query: 668 ttgcgcgtccctcggatgttgaagtgttcctctctccgcctgcgtgtgcgcttgatgggt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttgcgcgtccctcggatgttgaagtgttcctctctccgcctgcgtgtgcgcttgatgggt 758
Query: 728 gcattctgggagactctcccttcttcacgtc 758
|||||||||||||||||||||||||||||||
Sbjct: 759 gcattctgggagactctcccttcttcacgtc 789
Score = 480 bits (242), Expect = e-134
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 atggaggatgaaggcggaagagaggagtggcgtctctacgaagcttacaatgagctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 atggaggatgaaggcggaagagaggagtggcgtctctacgaagcttacaatgagctccac 91
Query: 61 gcgcttgcccaggagctccacacccccttcgacgcccccgccgttctcgtcgtcggccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gcgcttgcccaggagctccacacccccttcgacgcccccgccgttctcgtcgtcggccac 151
Query: 121 cagaccgacggcaagagcgccctcgtcgaagccctcatgggcttccagttcaaccacgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cagaccgacggcaagagcgccctcgtcgaagccctcatgggcttccagttcaaccacgtc 211
Query: 181 ggcggcggcaccaaaacccgccgccccatcaccctccacatgaaatacgaccctcaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggcggcggcaccaaaacccgccgccccatcaccctccacatgaaatacgaccctcaatct 271
Query: 241 ga 242
||
Sbjct: 272 ga 273
>gnl|LJGI|DC596940 homologue to UniRef100_A7Q6T0 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 493
Score = 500 bits (252), Expect = e-140
Identities = 252/252 (100%)
Strand = Plus / Plus
Query: 1279 caatatcatcgggcaatggccgaattccgttttgtcgttggaggaatcaagtgccctcca 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatatcatcgggcaatggccgaattccgttttgtcgttggaggaatcaagtgccctcca 60
Query: 1339 attactcgggaagaaatcgtaaatgcttgtggagttgaagacattcatgatggaacaaac 1398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attactcgggaagaaatcgtaaatgcttgtggagttgaagacattcatgatggaacaaac 120
Query: 1399 tactctaggactgcctgtgtaattgctgttgcaaaggctcgtgacacatttgaacctttt 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactctaggactgcctgtgtaattgctgttgcaaaggctcgtgacacatttgaacctttt 180
Query: 1459 cttcatcagttgggatgtagattgttgcatatactcaaacgattgcttccaatatctgtt 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcatcagttgggatgtagattgttgcatatactcaaacgattgcttccaatatctgtt 240
Query: 1519 tttcttcttcag 1530
||||||||||||
Sbjct: 241 tttcttcttcag 252
Score = 113 bits (57), Expect = 3e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 1531 gtgtatggaggacttggtaagcaccacaagatatgtctcatggtctctacacaataa 1587
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gtgtatggaggacttggtaagcaccacaagatatgtctcatggtctctacacaataa 410
>gnl|LJGI|FS336972 similar to UniRef100_A7Q6T0 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 637
Score = 488 bits (246), Expect = e-137
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 308 aaatccaggcatacattgaagctgagaatgcgaggttggagcgtgacagttgtcaattct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aaatccaggcatacattgaagctgagaatgcgaggttggagcgtgacagttgtcaattct 451
Query: 368 ccgcgaaggagataattatcaaggtggagtacaagtactgccctaatctgacaattatcg 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ccgcgaaggagataattatcaaggtggagtacaagtactgccctaatctgacaattatcg 511
Query: 428 acacgcctgggctcatcgcgcctgctccggggagaaagaatcgagcactgcaggcgcagg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 acacgcctgggctcatcgcgcctgctccggggagaaagaatcgagcactgcaggcgcagg 571
Query: 488 gccgggcggttgagtctctagtccgggctaagatgcagcacaaggagtttattatactct 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gccgggcggttgagtctctagtccgggctaagatgcagcacaaggagtttattatactct 631
Query: 548 gccttg 553
||||||
Sbjct: 632 gccttg 637
Score = 480 bits (242), Expect = e-134
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 atggaggatgaaggcggaagagaggagtggcgtctctacgaagcttacaatgagctccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggaggatgaaggcggaagagaggagtggcgtctctacgaagcttacaatgagctccac 144
Query: 61 gcgcttgcccaggagctccacacccccttcgacgcccccgccgttctcgtcgtcggccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gcgcttgcccaggagctccacacccccttcgacgcccccgccgttctcgtcgtcggccac 204
Query: 121 cagaccgacggcaagagcgccctcgtcgaagccctcatgggcttccagttcaaccacgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cagaccgacggcaagagcgccctcgtcgaagccctcatgggcttccagttcaaccacgtc 264
Query: 181 ggcggcggcaccaaaacccgccgccccatcaccctccacatgaaatacgaccctcaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcggcggcaccaaaacccgccgccccatcaccctccacatgaaatacgaccctcaatct 324
Query: 241 ga 242
||
Sbjct: 325 ga 326