Miyakogusa Predicted Gene
- Lj4g3v0336690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0336690.1 Non Chatacterized Hit- tr|I3SIX1|I3SIX1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; VIT1,Domain of unknown function
DUF125, transmembra,CUFF.46918.1
(696 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67316 similar to UniRef100_A7Q6X5 Cluster: Chromosome... 1338 0.0
gnl|LJGI|TC60057 similar to UniRef100_A7Q6X5 Cluster: Chromosome... 632 0.0
gnl|LJGI|AV427050 339 1e-92
gnl|LJGI|TC81163 similar to UniRef100_A7QN06 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|TC67316 similar to UniRef100_A7Q6X5 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 894
Score = 1338 bits (675), Expect = 0.0
Identities = 682/683 (99%), Gaps = 1/683 (0%)
Strand = Plus / Plus
Query: 15 aactaatggagtttcctcaaaccatgttgagatccctatccattgcaatattattattat 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactaatggagtttcctcaaaccatgttgagatccctatccattgcaatattattattat 60
Query: 75 ggggccaaaacaaagcctagaggttgaagagagcaacaatattgactactctggaagagc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggccaaaacaaagcctagaggttgaagagagcaacaatattgactactctggaagagc 120
Query: 135 tcagtgggtccgagcagctgtgttgggtgcgaatgatgggttggtctcagtagcctctct 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagtgggtccgagcagctgtgttgggtgcgaatgatgggttggtctcagtagcctctct 180
Query: 195 gatgatgggtgttggagctataaaggaagatgtgagtgccatgcttcttgctggttttgc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatgatgggtgttggagctataaaggaagatgtgagtgccatgcttcttgctggttttgc 240
Query: 255 tgggttggtagctggagcttgtagcatggcaattggagagtttgtctctgtctacactca 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggttggtagctggagcttgtagcatggcaattggagagtttgtctctgtctacactca 300
Query: 315 gtatgacatagagaaagctcagattaaaagaaagagggaagctgataataataacaataa 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatgacatagagaaagctcagattaaaagaaagagggaagctgataataataacaataa 360
Query: 375 taaagggctaagtgtggatgatgaagaagctgaaagggagaagcttccaaacccatttca 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaagggctaagtgtggatgatgaagaagctgaaagggagaagcttccaaacccatttca 420
Query: 435 agctgccttagcatcagcacttgcattttctgtgggtgctctggtgccactcatagcagc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctgccttagcatcagcacttgcattttctgtgggtgctctggtgccactcatagcagc 480
Query: 495 tgtgtttatcaggaatcgcaagattaggcttggtattgttgctgctgtggctagcttggc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtgtttatcaggaatcgcaagattaggcttggtattgttgctgctgtggctagcttggc 540
Query: 555 attgttggcatttggagtggtaggagcagtactcgg-aaaaactccagtggggatgtcgt 613
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 attgttggcatttggagtggtaggagcagtactcggaaaaaactccagtggggatgtcgt 600
Query: 614 gtttcagggtacttattggaggttggatggctatggccataacattttacctcaccaaat 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtttcagggtacttattggaggttggatggctatggccataacattttacctcaccaaat 660
Query: 674 tgattggctcttctggcctttga 696
|||||||||||||||||||||||
Sbjct: 661 tgattggctcttctggcctttga 683
>gnl|LJGI|TC60057 similar to UniRef100_A7Q6X5 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 781
Score = 632 bits (319), Expect = 0.0
Identities = 581/668 (86%), Gaps = 19/668 (2%)
Strand = Plus / Plus
Query: 36 ccatgttgagatccctatccattgcaatattattattatggggccaaaacaaagcctaga 95
||||||||||||||| |||||| |||| | | |||| ||| |||||||||||||| ||
Sbjct: 79 ccatgttgagatcccgatccataccaatgtcaatattgtggagccaaaacaaagccaagg 138
Query: 96 ggttgaagagagcaacaata---ttgactactctggaagagctcagtgggtccgagcagc 152
||||||||||||||| |||| |||||||| || || ||||||||| | ||||||||
Sbjct: 139 ggttgaagagagcaataataatattgactaccctcagagggctcagtggcttcgagcagc 198
Query: 153 tgtgttgggtgcgaatgatgggttggtctcagtagcctctctgatgatgggtgttggagc 212
|||||||| ||||||||||||||||| || || || || ||||||||||||||||||||
Sbjct: 199 ggtgttgggagcgaatgatgggttggtgtctgttgcatcactgatgatgggtgttggagc 258
Query: 213 tataaaggaagatgtgagtgccatgcttcttgctggttttgctgggttggtagctggagc 272
| | ||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgttaagaaagatgcgagtgccttgcttcttgctggttttgctgggttggtagctggagc 318
Query: 273 ttgtagcatggcaattggagagtttgtctctgtctacactcagtatgacatagagaaagc 332
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 319 ttgtagcatggcaattggagagtttgtctctgtctacactcagtatgacatagagatagc 378
Query: 333 tcagattaaaagaaagagggaagctgataataataacaataataaagggctaagtgtgga 392
||||||| ||||| |||||||||| ||| ||||||| || | | | ||
Sbjct: 379 tcagattgaaagagagagggaagc---------taatcataataatggagttaatttg-- 427
Query: 393 tgatgaagaagctgaaagggagaagcttccaaacccatttcaagc----tgccttagcat 448
|||||||||||| |||||||||| ||||| ||||||||||| || |||| ||||||
Sbjct: 428 -gatgaagaagctcaaagggagaaacttcccaacccatttcaggctgcatgccctagcat 486
Query: 449 cagcacttgcattttctgtgggtgctctggtgccactcatagcagctgtgtttatcagga 508
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 487 cagcacttgcattttctgtgggtgctctggtgccactgatagcagctgtgtttataagga 546
Query: 509 atcgcaagattaggcttggtattgttgctgctgtggctagcttggcattgttggcatttg 568
||| || ||||||||||||| ||||||| |||||||||||||||||||| |||| |||||
Sbjct: 547 atcacatgattaggcttggtgttgttgcagctgtggctagcttggcattattggtatttg 606
Query: 569 gagtggtaggagcagtactcggaaaaactccagtggggatgtcgtgtttcagggtactta 628
||||||| |||||||| || |||||||| |||||| || ||| ||||||||||| || |
Sbjct: 607 gagtggttggagcagtgcttggaaaaaccccagtgatgaggtcttgtttcagggtgctga 666
Query: 629 ttggaggttggatggctatggccataacattttacctcaccaaattgattggctcttctg 688
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 667 ttggaggttggatggctatggccataacatttggcctcaccaaattgattggatcttctg 726
Query: 689 gcctttga 696
| ||||||
Sbjct: 727 gtctttga 734
>gnl|LJGI|AV427050
Length = 406
Score = 339 bits (171), Expect = 1e-92
Identities = 304/349 (87%), Gaps = 12/349 (3%)
Strand = Plus / Plus
Query: 31 tcaaaccatgttgagatccctatccattgcaatattattattatggggccaaaacaaagc 90
||||||||||||||||||||||||||| |||| || | || ||||||| |||||
Sbjct: 64 tcaaaccatgttgagatccctatccatgccaatgtttt------ggagccaaaagaaagc 117
Query: 91 ctagaggttgaagagagcaacaata------ttgactactctggaagagctcagtgggtc 144
|| ||| |||||||||||||||| ||||||||||| || ||||||||| ||
Sbjct: 118 gaaggggtagaagagagcaacaataattatattgactactctcagagggctcagtggctc 177
Query: 145 cgagcagctgtgttgggtgcgaatgatgggttggtctcagtagcctctctgatgatgggt 204
||||| || || ||||| || |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 178 cgagcggcggttttgggagcaaatgatgggttggtctcagttgcctcactgatgatgggt 237
Query: 205 gttggagctataaaggaagatgtgagtgccatgcttcttgctggttttgctgggttggta 264
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gttggagctgttaaggaagatgtgagtgccatgcttcttgctggttttgctgggttggta 297
Query: 265 gctggagcttgtagcatggcaattggagagtttgtctctgtctacactcagtatgacata 324
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 298 gctggagcttgtagcatggcaattggagagtttgtctctgtctatactcagtatgacata 357
Query: 325 gagaaagctcagattaaaagaaagagggaagctgataataataacaata 373
|||| |||||| ||||||||| | || ||| || |||||||||| ||||
Sbjct: 358 gagatagctcaaattaaaagagaaagagaaactaataataataataata 406
>gnl|LJGI|TC81163 similar to UniRef100_A7QN06 Cluster: Chromosome undetermined
scaffold_129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (78%)
Length = 941
Score = 52.0 bits (26), Expect = 5e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 251 ttgctgggttggtagctggagcttgtagcatggcaattggagagtttgtctctgtctaca 310
|||| ||||| || ||||| || || |||||||| |||||||||||||| ||||| |||
Sbjct: 316 ttgccgggttagttgctggcgcgtgcagcatggccattggagagtttgtttctgtttact 375
Query: 311 ctcagtatga 320
| ||||||||
Sbjct: 376 cccagtatga 385