Miyakogusa Predicted Gene

Lj4g3v0336020.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0336020.1 Non Chatacterized Hit- tr|I1K2T4|I1K2T4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,68.08,0,FAMILY NOT
NAMED,NULL; EamA,Drug/metabolite transporter; Multidrug resistance
efflux transporter Emr,CUFF.46852.1
         (729 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60153 weakly similar to UniRef100_A2Q3V4 Cluster: Int...   139   3e-32
gnl|LJGI|TC61995 weakly similar to UniRef100_A7QBC8 Cluster: Chr...    86   4e-16

>gnl|LJGI|TC60153 weakly similar to UniRef100_A2Q3V4 Cluster: Integral membrane
           protein DUF6 containing protein; n=1; Medicago
           truncatula|Rep: Integral membrane protein DUF6
           containing protein - Medicago truncatula (Barrel medic),
           partial (38%)
          Length = 772

 Score =  139 bits (70), Expect = 3e-32
 Identities = 70/70 (100%)
 Strand = Plus / Plus

                                                                       
Query: 660 ctcaagcacggcattgatgatcttaatgggggcaattcaagccacagtttttgctctttg 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ctcaagcacggcattgatgatcttaatgggggcaattcaagccacagtttttgctctttg 61

                     
Query: 720 tgttgagaag 729
           ||||||||||
Sbjct: 62  tgttgagaag 71


>gnl|LJGI|TC61995 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
           scaffold_73, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 769

 Score = 85.7 bits (43), Expect = 4e-16
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                       
Query: 178 gctcttatttttgaaagagagaacaggccaaagctgacatggagggtgcttttgatgtca 237
           ||||||||| |||||||  | ||||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 281 gctcttattcttgaaaggaaaaacagaccaaaactgacttggagggtgcttttcatgtca 340

                                                      
Query: 238 ttcttttgtggtctatttggagcaagtttgctacacaaccttt 280
           || || |||||||||||||| | ||||||| | || |||||||
Sbjct: 341 tttttatgtggtctatttgggggaagtttgttccaaaaccttt 383