Miyakogusa Predicted Gene

Lj4g3v0336000.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0336000.1 Non Chatacterized Hit- tr|C6TJG1|C6TJG1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46944
PE,61.41,0,EamA,Drug/metabolite transporter; Multidrug resistance
efflux transporter EmrE,NULL; FAMILY NOT NAME,CUFF.46850.1
         (1101 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81568 weakly similar to UniRef100_A7QWK0 Cluster: Chr...  1447   0.0  
gnl|LJGI|FS358381                                                     276   3e-73

>gnl|LJGI|TC81568 weakly similar to UniRef100_A7QWK0 Cluster: Chromosome chr4
           scaffold_205, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_205, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (27%)
          Length = 820

 Score = 1447 bits (730), Expect = 0.0
 Identities = 742/746 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttaatttgtgcaagtttgtagccatagatggtgtgaagccaatactgttaatgata 60
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 75  atggttaatttgtgcaagtttgtagccatagatggtgtgaagcccatactgttaattata 134

                                                                       
Query: 61  gtggtccagggtatacatgcattgcttagtattatgataaagatggtaacaaatgatgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gtggtccagggtatacatgcattgcttagtattatgataaagatggtaacaaatgatgga 194

                                                                       
Query: 121 aaaagcttaagtgttcttgttgcctaccggttcctcttttctgctactttcaatgttcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aaaagcttaagtgttcttgttgcctaccggttcctcttttctgctactttcaatgttcct 254

                                                                       
Query: 181 gttgctctcctctttgaaaggaaaagcatgcaacacattactggcatagttctattccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gttgctctcctctttgaaaggaaaagcatgcaacacattactggcatagttctattccaa 314

                                                                       
Query: 241 gcttttctttgtggattatttgggggatccttacaacaaaacctctatgctaaatctttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcttttctttgtggattatttgggggatccttacaacaaaacctctatgctaaatctttg 374

                                                                       
Query: 301 gccttgataccagcaacatacacaatcacaatgttaaacctcatccccgttgttacctac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gccttgataccagcaacatacacaatcacaatgttaaacctcatccccgttgttacctac 434

                                                                       
Query: 361 attatgactgtttctcttagattggagaagccaaatcttggaacaagagctggcaaggca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attatgactgtttctcttagattggagaagccaaatcttggaacaagagctggcaaggca 494

                                                                       
Query: 421 aaattactgggaacattaactggagttggtggtgctatgatcctcactttatatgaaggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aaattactgggaacattaactggagttggtggtgctatgatcctcactttatatgaaggg 554

                                                                       
Query: 481 agaagaatattcaactggcccctacacattgatttatcgaaatatatgtcaccaccacca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agaagaatattcaactggcccctacacattgatttatcgaaatatatgtcaccaccacca 614

                                                                       
Query: 541 gccaatggttctcgcttgtggggtctcatcctagctctgggaacatctctctgtttctca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gccaatggttctcgcttgtggggtctcatcctagctctgggaacatctctctgtttctca 674

                                                                       
Query: 601 ttgtggtacatagtccaggcaaagatgagtcagaagtttccgtggcagtattcagttgca 660
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 675 ttgtggtacatagtccaggcaaatatgagtcagaagtttccgtggcagtattcagttgca 734

                                                                       
Query: 661 gctttaacttctgtaatgagcgcaatccaatccattatatatgctctttgcactgagaga 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gctttaacttctgtaatgagcgcaatccaatccattatatatgctctttgcactgagaga 794

                                     
Query: 721 gattggagccaatggaaagttgaatg 746
           |||||||||||||| |||||||||||
Sbjct: 795 gattggagccaatgcaaagttgaatg 820


>gnl|LJGI|FS358381 
          Length = 370

 Score =  276 bits (139), Expect = 3e-73
 Identities = 142/143 (99%)
 Strand = Plus / Minus

                                                                        
Query: 959  gattgtacatgttgttgtggggtaaaagcaaagaatcaaagatggtagaaagtgacgatg 1018
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370  gattgtacaggttgttgtggggtaaaagcaaagaatcaaagatggtagaaagtgacgatg 311

                                                                        
Query: 1019 tgtccacaaaagcttctgttccatgtgattcacctttggcttgcaatcaaaaggagcatg 1078
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310  tgtccacaaaagcttctgttccatgtgattcacctttggcttgcaatcaaaaggagcatg 251

                                   
Query: 1079 attatgtgtcaacaattccttag 1101
            |||||||||||||||||||||||
Sbjct: 250  attatgtgtcaacaattccttag 228