Miyakogusa Predicted Gene
- Lj4g3v0335830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0335830.1 CUFF.46864.1
(2373 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72228 similar to UniRef100_A7Q979 Cluster: Chromosome... 2948 0.0
gnl|LJGI|TC74124 weakly similar to UniRef100_A7Q979 Cluster: Chr... 940 0.0
gnl|LJGI|TC81223 similar to UniRef100_A0Y864 Cluster: Transcript... 206 5e-52
>gnl|LJGI|TC72228 similar to UniRef100_A7Q979 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 2024
Score = 2948 bits (1487), Expect = 0.0
Identities = 1512/1519 (99%), Gaps = 1/1519 (0%)
Strand = Plus / Plus
Query: 856 ttacatgcaactccaccgagagtacattcaaagagccggacgtacgagctaaagcagggg 915
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 13 ttacatgcaactccaccgagagtacattcacttagacggacgtacgagctaaagcagggg 72
Query: 916 ccacaattaccaattgaggagaaacataaacattggtcacttgcgtctccgtggttaaat 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ccacaattaccaattgaggagaaacataaacattggtcacttgcgtctccgtggttaaat 132
Query: 976 ggtaataatctaagagatagtttgatgccaaaagatggtgacgatggtttt-ttcccaac 1034
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 133 ggtaataatctaagagatagtttgatgccaaaagatggtgacgatggtttttttcccaac 192
Query: 1035 tactggaaatgaattaaaacctgaagctgtaacttcaagtcgtaagtatcgtgtaagagt 1094
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 193 tactggagatgaattaaaacctgaagttgtaacttcaagtcgtaagtatcgtgtaagagt 252
Query: 1095 gctagtatgcgccccatcaaattctgccctggatgagattgtgttgcgtgttcgcaatgc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gctagtatgcgccccatcaaattctgccctggatgagattgtgttgcgtgttcgcaatgc 312
Query: 1155 aggtgtccatgatgaaaatggccgtggttattgcccaaacattgtgagaattggtctcaa 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggtgtccatgatgaaaatggccgtggttattgcccaaacattgtgagaattggtctcaa 372
Query: 1215 agcacatcattctatcaaggctgtttcccttgatgaacttttaaaacaaaaacgttctag 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcacatcattctatcaaggctgtttcccttgatgaacttttaaaacaaaaacgttctag 432
Query: 1275 tggcaacaaatcatccacagataagcagagtactggtcctgcaggaagcaatgacgacac 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tggcaacaaatcatccacagataagcagagtactggtcctgcaggaagcaatgacgacac 492
Query: 1335 tctcagggctgcaattttggatgaagccacaattgtcttctccactctcagctttagtgg 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tctcagggctgcaattttggatgaagccacaattgtcttctccactctcagctttagtgg 552
Query: 1395 ttcaaacagtttaagtaaactcagtcgcagctttgatgttgtgattatagatgaggcagc 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttcaaacagtttaagtaaactcagtcgcagctttgatgttgtgattatagatgaggcagc 612
Query: 1455 acaagctgtggaacctgcagttcttgttcccttggccaatcaatgcaaaaaagtttttct 1514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acaagctgtggaacctgcagttcttgttcccttggccaatcaatgcaaaaaagtttttct 672
Query: 1515 ggttggtgatccagctcaacttccagcaactgtgatttcagacattgctaagaatcatgg 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggttggtgatccagctcaacttccagcaactgtgatttcagacattgctaagaatcatgg 732
Query: 1575 atatggtacaagcttatttgaaagattgaagcttgctggttatccagttaaaatgttgaa 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 atatggtacaagcttatttgaaagattgaagcttgctggttatccagttaaaatgttgaa 792
Query: 1635 gactcaataccgaatgcatcccgagataagaagctttccctctagggagttttatgaaga 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gactcaataccgaatgcatcccgagataagaagctttccctctagggagttttatgaaga 852
Query: 1695 ttcattgcaagatggggatggcattaaattacatacaacacgcgcatggcatatgtaccg 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ttcattgcaagatggggatggcattaaattacatacaacacgcgcatggcatatgtaccg 912
Query: 1755 ctgctttggcccattctgcttctttgacatacatgagggaaaagaggctcggccttctgg 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ctgctttggcccattctgcttctttgacatacatgagggaaaagaggctcggccttctgg 972
Query: 1815 gagtggctcgtggataaacgttgaggaagtcgattttgtactattcttatatcaaaagct 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 gagtggctcgtggataaacgttgaggaagtcgattttgtactattcttatatcaaaagct 1032
Query: 1875 ggtatccctttatccgcaactgaagtctggtaaccaagttgctattatatcaccctatag 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 ggtatccctttatccgcaactgaagtctggtaaccaagttgctattatatcaccctatag 1092
Query: 1935 tcatcaagtaaaactcttccaaaaacgttttgaagagacttttggagtgtcatcagagaa 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 tcatcaagtaaaactcttccaaaaacgttttgaagagacttttggagtgtcatcagagaa 1152
Query: 1995 agtagtggatatatgtactgttgatggttgccagggacgtgaaaaggacgttgcaatatt 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 agtagtggatatatgtactgttgatggttgccagggacgtgaaaaggacgttgcaatatt 1212
Query: 2055 ttcatgtgtcagggcaagcaaagataaaggcatagggtttgtggcggacattcgacgaat 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 ttcatgtgtcagggcaagcaaagataaaggcatagggtttgtggcggacattcgacgaat 1272
Query: 2115 gaacgtggggatcaccagagcaaagtctgcagtattggtggttggatctgcttcaacatt 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 gaacgtggggatcaccagagcaaagtctgcagtattggtggttggatctgcttcaacatt 1332
Query: 2175 gaggaggaatgaacaatggaataagctagtggaaagtgctgagactagggactgtttatt 2234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 gaggaggaatgaacaatggaataagctagtggaaagtgctgagactagggactgtttatt 1392
Query: 2235 caaagtttctcagccatattcctcatttttcagcgaagaaagtctggcatctttggtagc 2294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1393 caaagtttctcagccatattcctcatttttcagcgaagaaagtctggcatctttggtagc 1452
Query: 2295 taaggtggacgaatcatcccagaagacggaacctgctgacggggaagataattatgtgca 2354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1453 taaggtggacgaatcatcccagaagacggaacctgctgacggggaagataattatgtgca 1512
Query: 2355 gtttgccaatgatgcagca 2373
|||||||||||||||||||
Sbjct: 1513 gtttgccaatgatgcagca 1531
>gnl|LJGI|TC74124 weakly similar to UniRef100_A7Q979 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (4%)
Length = 625
Score = 940 bits (474), Expect = 0.0
Identities = 481/482 (99%), Gaps = 1/482 (0%)
Strand = Plus / Plus
Query: 1 atggcggttgacaaggaaaagattgaagaagaatctgtaatccgccgcttctaccgtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atggcggttgacaaggaaaagattgaagaagaatctgtaatccgccgcttctaccgtatc 203
Query: 61 attctgagttgggattacttttgtctacaaaaaggaactgtatcagcatccaaactcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 attctgagttgggattacttttgtctacaaaaaggaactgtatcagcatccaaactcgtc 263
Query: 121 aaagtcaaggaacgctacaaagacgttgatgattacattgctaccttcgaacccctcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaagtcaaggaacgctacaaagacgttgatgattacattgctaccttcgaacccctcatt 323
Query: 181 ttcgaagaagctaaatcccagatcattaaagataaagaggacgacgaggtgactgaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcgaagaagctaaatcccagatcattaaagataaagaggacgacgaggtgactgaatgg 383
Query: 241 aagttgggggtggtaaatagttggaatgaggcagatgactttcattttctagaatttcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagttgggggtggtaaatagttggaatgaggcagatgactttcattttctagaatttcct 443
Query: 301 tgcgaattgattgagggagagtcgataaataaggatgatcttttac-ttctttcaaaaga 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 tgcgaattgattgagggagagtcgataaataaggatgatcttttactttctttcaaaaga 503
Query: 360 aaagtttctgggtggcaaaaaattacctaccgtgtatgcatttgctttggtggaccactc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaagtttctgggtggcaaaaaattacctaccgtgtatgcatttgctttggtggaccactc 563
Query: 420 acgaaaatattctgatacaagagttctgcgtgttagactctatctagccggtgaattctc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acgaaaatattctgatacaagagttctgcgtgttagactctatctagccggtgaattctc 623
Query: 480 ac 481
||
Sbjct: 624 ac 625
>gnl|LJGI|TC81223 similar to UniRef100_A0Y864 Cluster: Transcriptional regulator, AraC
family protein; n=1; marine gamma proteobacterium
HTCC2143|Rep: Transcriptional regulator, AraC family
protein - marine gamma proteobacterium HTCC2143, partial
(5%)
Length = 683
Score = 206 bits (104), Expect = 5e-52
Identities = 114/116 (98%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1255 ttaaaacaaaaacgttctagtggcaacaaatcatccacagataagcagagtactggtcct 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttaaaacaaaaacgttctagtggcaacaaatcatccacagataagcagagtactggtcct 601
Query: 1315 gcaggaagcaatgacgacactctcagggctgcaattttggatgaagccacaattgt 1370
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 602 gcaggaagcaatgacgacactctcagggctgc-attttggatgaagccaccattgt 656