Miyakogusa Predicted Gene
- Lj4g3v0258690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0258690.1 CUFF.46780.1
(2322 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78525 similar to UniRef100_A7QQN5 Cluster: Chromosome... 1178 0.0
gnl|LJGI|DC598717 similar to UniRef100_Q8H1A2 Cluster: Mini-chro... 924 0.0
gnl|LJGI|TC74086 90 7e-17
>gnl|LJGI|TC78525 similar to UniRef100_A7QQN5 Cluster: Chromosome undetermined
scaffold_143, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_143,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (23%)
Length = 693
Score = 1178 bits (594), Expect = 0.0
Identities = 646/654 (98%), Gaps = 7/654 (1%)
Strand = Plus / Plus
Query: 1 atggatctcagcgaagaagttagggcagctcacaagcgagaattcgccgatttcctcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atggatctcagcgaagaagttagggcagctcacaagcgagaattcgccgatttcctcgat 99
Query: 61 caagatgttggacaaggcatttacatgaaggagatgaaatccctcatcaacctcaagcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 caagatgttggacaaggcatttacatgaaggagatgaaatccctcatcaacctcaagcgt 159
Query: 121 cgccgcctcatcgtcgacatctccgatctccacaacttccgcgacttgggaaa-caggat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 160 cgccgcctcatcgtcgacatctccgatctccacaacttccgcgacttgggaaaacaggat 219
Query: 180 ttt-gagg-aatcctagtgagtacatgcaatccttctgcgatgcgg-tcacggatgcggt 236
||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 220 ttttgagggaatcctagtgagtacatgcaatccttctgcgatgcgggtcacggatgcggc 279
Query: 237 tcgtgctatt-gatcccaagtttttgaaggaaggggaacaggtgcttgtgggatttgaa- 294
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tcgtgctatttgatcccaagtttttgaaggaaggggaacaggtgcttgtgggatttgaaa 339
Query: 295 ggtcc-ttttgtttctcgccgagtcactccccgggaacttctgtctcaattcattggttc 353
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggtcccttttgtttctcgccgagtcactccccgggaacttctgtctcaattcattggttc 399
Query: 354 catggtctgtgttgagggcattgtcacaaaatgttctcttgttaggccaaaggttgttaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 catggtctgtgttgagggcattgtcacaaaatgttctcttgttaggccaaaggttgttaa 459
Query: 414 aagtgttcatttctgccccaccacgggaaacttcaccactcgtgattatcgagatattac 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aagtgttcatttctgccccaccacgggaaacttcaccactcgtgattatcgagatattac 519
Query: 474 atccaatttgggcttgccaacagggtctgtttatcctacaagggatgaaaatggcaactt 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atccaatttgggcttgccaacagggtctgtttatcctacaagggatgaaaatggcaactt 579
Query: 534 acttgtcactgagtttggattgtgcaaatataaagatcatcaaaccttgtccatgcaaga 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acttgtcactgagtttggattgtgcaaatataaagatcatcaaaccttgtccatgcaaga 639
Query: 594 agttcctgagaattctgctcctggtcagctcccaagaacagtggatatcatagt 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agttcctgagaattctgctcctggtcagctcccaagaacagtggatatcatagt 693
>gnl|LJGI|DC598717 similar to UniRef100_Q8H1A2 Cluster: Mini-chromosome maintenance
protein MCM3; n=1; Pisum sativum|Rep: Mini-chromosome
maintenance protein MCM3 - Pisum sativum (Garden pea),
partial (22%)
Length = 473
Score = 924 bits (466), Expect = 0.0
Identities = 471/473 (99%)
Strand = Plus / Plus
Query: 1333 gctgcgaatcccatatatggaacttatgatcgttcgttgaccccaactaaaaatattgga 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgcgaatcccatatatggaacttatgatcgttcgttgaccccaactaaaaatattgga 60
Query: 1393 ctaccagactccttgctttctcgatttgatctactttttattgtgttggatcaaatggat 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctaccagactccttgctttctcgatttgatctactttttattgtgttggatcaaatggat 120
Query: 1453 cctgatattgatcgtcgaatatcagagcatgtcctgcgtatgcatcgatttctttcgccc 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctgatattgatcgtcgaatatcagagcatgtcctgcgtatgcatcgatttctttcgccc 180
Query: 1513 atggatggaggtggggcagcactagatgggagctcaggatatggaagacaagatgaagct 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggatggaggtggggcagcactagatgggagctcaggatatggaagacaagatgaagct 240
Query: 1573 gatgcagaatcatctatctttgtccaatataacagaatgttacatgggaagaaaactgta 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgcagaatcatctatctttgtccaatataacagaatgttacatgggaagaaaactgta 300
Query: 1633 aaaggaaacaaacgtgatacactcactataaagtttcttaaaaagtatatccattatgct 1692
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 naaggaaacaaacgtgatacactcactataaagtttcttaaaaagtatatccattatgct 360
Query: 1693 aagcatagggttcaacctgatttgactgatgaggcatctgaccagatagccacagcatat 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcatagggttcaacctgatttgactgatgaggcatctgaccagatagccacagcatat 420
Query: 1753 gctgagctcagaaattcaaattcaaatgctaagactggaggaacgcttcctat 1805
|||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 gctgagctcagaaattcaaattcagatgctaagactggaggaacgcttcctat 473
>gnl|LJGI|TC74086
Length = 584
Score = 89.7 bits (45), Expect = 7e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 2278 agagtgatgatagttgctggaatggtgcatatgatatcaggttga 2322
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagtgatgatagttgctggaatggtgcatatgatatcaggttga 45