Miyakogusa Predicted Gene
- Lj4g3v0258600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0258600.1 Non Chatacterized Hit- tr|I3SUQ0|I3SUQ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98,0,RIBOSOMAL_S11,Ribosomal S11, conserved site; 40S RIBOSOMAL
PROTEIN S14,NULL; 40S RIBOSOMAL PROTEIN S,CUFF.46802.1
(453 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60994 homologue to UniRef100_A7QQP3 Cluster: Chromoso... 898 0.0
gnl|LJGI|GO036699 homologue to UniRef100_A7QQP3 Cluster: Chromos... 500 e-141
gnl|LJGI|TC62600 homologue to UniRef100_A7QQP3 Cluster: Chromoso... 470 e-132
gnl|LJGI|TC74362 homologue to UniRef100_O22584 Cluster: 40S ribo... 260 7e-69
gnl|LJGI|BW600013 homologue to UniRef100_O22584 Cluster: 40S rib... 206 9e-53
>gnl|LJGI|TC60994 homologue to UniRef100_A7QQP3 Cluster: Chromosome undetermined
scaffold_143, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_143,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 767
Score = 898 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Plus
Query: 1 atgtcgaagagaaaggttagagagcctaaggaggataacgtgactcttggtcctgctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atgtcgaagagaaaggttagagagcctaaggaggataacgtgactcttggtcctgctgtt 125
Query: 61 agagatggagagcatgtttttggcgtggcacgcatttttgcatcattcaatgataccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agagatggagagcatgtttttggcgtggcacgcatttttgcatcattcaatgataccttc 185
Query: 121 attcatgtgactgatttgtctgggagagaaacacttgtccgcattaccggtggaatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 attcatgtgactgatttgtctgggagagaaacacttgtccgcattaccggtggaatgaag 245
Query: 181 gtcaaggctgacagagatgagtcatctccatatgctgctatgcttgctgctcaagatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtcaaggctgacagagatgagtcatctccatatgctgctatgcttgctgctcaagatgtt 305
Query: 241 gctaccagatgcaaggagttgggcataacagctcttcatatcaggctccgcgcaactggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gctaccagatgcaaggagttgggcataacagctcttcatatcaggctccgcgcaactggc 365
Query: 301 ggaaacaagaccaaaacacctggtccaggtgctcaagctgctctccgtgctttggctcgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ggaaacaagaccaaaacacctggtccaggtgctcaagctgctctccgtgctttggctcgg 425
Query: 361 tctggaatgaaaatcggtcgcatagaggatgtgaccccaattccttcagatagcactcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tctggaatgaaaatcggtcgcatagaggatgtgaccccaattccttcagatagcactcgt 485
Query: 421 agaaagagtggtagaaggggtaggaggctctga 453
|||||||||||||||||||||||||||||||||
Sbjct: 486 agaaagagtggtagaaggggtaggaggctctga 518
>gnl|LJGI|GO036699 homologue to UniRef100_A7QQP3 Cluster: Chromosome undetermined
scaffold_143, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_143,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (92%)
Length = 677
Score = 500 bits (252), Expect = e-141
Identities = 255/256 (99%)
Strand = Plus / Plus
Query: 1 atgtcgaagagaaaggttagagagcctaaggaggataacgtgactcttggtcctgctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtcgaagagaaaggttagagagcctaaggaggataacgtgactcttggtcctgctgtt 120
Query: 61 agagatggagagcatgtttttggcgtggcacgcatttttgcatcattcaatgataccttc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaggtggagagcatgtttttggcgtggcacgcatttttgcatcattcaatgataccttc 180
Query: 121 attcatgtgactgatttgtctgggagagaaacacttgtccgcattaccggtggaatgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attcatgtgactgatttgtctgggagagaaacacttgtccgcattaccggtggaatgaag 240
Query: 181 gtcaaggctgacagagatgagtcatctccatatgctgctatgcttgctgctcaagatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcaaggctgacagagatgagtcatctccatatgctgctatgcttgctgctcaagatgtt 300
Query: 241 gctaccagatgcaagg 256
||||||||||||||||
Sbjct: 301 gctaccagatgcaagg 316
Score = 341 bits (172), Expect = 2e-93
Identities = 179/180 (99%), Gaps = 1/180 (0%)
Strand = Plus / Plus
Query: 254 aggagttgggcataacagctcttcatatcaggctccgcgcaactggcggaaacaagacca 313
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 499 aggagttgggcataacagctcttcatatcaggctccgcgcaactggcggaa-caagacca 557
Query: 314 aaacacctggtccaggtgctcaagctgctctccgtgctttggctcggtctggaatgaaaa 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaacacctggtccaggtgctcaagctgctctccgtgctttggctcggtctggaatgaaaa 617
Query: 374 tcggtcgcatagaggatgtgaccccaattccttcagatagcactcgtagaaagagtggta 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tcggtcgcatagaggatgtgaccccaattccttcagatagcactcgtagaaagagtggta 677
>gnl|LJGI|TC62600 homologue to UniRef100_A7QQP3 Cluster: Chromosome undetermined
scaffold_143, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_143,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 738
Score = 470 bits (237), Expect = e-132
Identities = 396/449 (88%)
Strand = Plus / Plus
Query: 1 atgtcgaagagaaaggttagagagcctaaggaggataacgtgactcttggtcctgctgtt 60
|||||||||||||||||||| ||||||||||| || |||||||| || ||||| ||||||
Sbjct: 81 atgtcgaagagaaaggttagggagcctaaggaagacaacgtgaccctgggtccagctgtt 140
Query: 61 agagatggagagcatgtttttggcgtggcacgcatttttgcatcattcaatgataccttc 120
|||||||| || ||||| |||||||| || ||||| ||||| || ||||||||||| |||
Sbjct: 141 agagatggtgaacatgtctttggcgttgctcgcatctttgcttccttcaatgatactttc 200
Query: 121 attcatgtgactgatttgtctgggagagaaacacttgtccgcattaccggtggaatgaag 180
|||||||| |||||||||||||| || ||||| ||||| ||||| || ||||||||||||
Sbjct: 201 attcatgtcactgatttgtctggcagggaaacccttgtacgcatcactggtggaatgaag 260
Query: 181 gtcaaggctgacagagatgagtcatctccatatgctgctatgcttgctgctcaagatgtt 240
|| || ||||||||||||||||||||||| ||||| ||||||||||| || || ||||||
Sbjct: 261 gtgaaagctgacagagatgagtcatctccttatgcagctatgcttgcagcccaggatgtt 320
Query: 241 gctaccagatgcaaggagttgggcataacagctcttcatatcaggctccgcgcaactggc 300
|||||||||||||||||||||||||| || ||||||||||||| |||||| || |||||
Sbjct: 321 gctaccagatgcaaggagttgggcattactgctcttcatatcaagctccgtgccactggt 380
Query: 301 ggaaacaagaccaaaacacctggtccaggtgctcaagctgctctccgtgctttggctcgg 360
||||||||||| ||||| |||||||| |||||||| |||||||||||||| | |||||
Sbjct: 381 ggaaacaagacaaaaactcctggtcctggtgctcaggctgctctccgtgcccttgctcgt 440
Query: 361 tctggaatgaaaatcggtcgcatagaggatgtgaccccaattccttcagatagcactcgt 420
|| ||||||||||| |||||||||||||||||||| || ||||| || |||||||| ||
Sbjct: 441 tcaggaatgaaaattggtcgcatagaggatgtgactcctattccctctgatagcacccgc 500
Query: 421 agaaagagtggtagaaggggtaggaggct 449
|||||||||||||||||||| || |||||
Sbjct: 501 agaaagagtggtagaaggggaagaaggct 529
>gnl|LJGI|TC74362 homologue to UniRef100_O22584 Cluster: 40S ribosomal protein S14;
n=1; Lupinus luteus|Rep: 40S ribosomal protein S14 -
Lupinus luteus (European yellow lupin), partial (71%)
Length = 471
Score = 260 bits (131), Expect = 7e-69
Identities = 231/263 (87%), Gaps = 1/263 (0%)
Strand = Plus / Plus
Query: 56 ctgttagagatggagagcatgtttttggcgtggcacgcatttttgcatcattcaatgata 115
||||||||||||| || ||||| |||||||| || ||||| ||||| || ||||||||||
Sbjct: 5 ctgttagagatggtgaacatgtctttggcgttgctcgcatctttgcttccttcaatgata 64
Query: 116 cctt-cattcatgtgactgatttgtctgggagagaaacacttgtccgcattaccggtgga 174
| || ||||||||| |||||||||||||| || ||||| ||||| ||||| || ||||||
Sbjct: 65 catttcattcatgtcactgatttgtctggcagggaaacccttgtacgcatcactggtgga 124
Query: 175 atgaaggtcaaggctgacagagatgagtcatctccatatgctgctatgcttgctgctcaa 234
|||||||| || ||||||||||||||||||||||| ||||| ||||||||||| || ||
Sbjct: 125 atgaaggtgaaagctgacagagatgagtcatctccttatgcagctatgcttgcagcccag 184
Query: 235 gatgttgctaccagatgcaaggagttgggcataacagctcttcatatcaggctccgcgca 294
||||||||||||| |||||||||||||||||| || ||||||||||||| |||||| ||
Sbjct: 185 gatgttgctaccaaatgcaaggagttgggcattactgctcttcatatcaagctccgtgcc 244
Query: 295 actggcggaaacaagaccaaaac 317
||||| ||||||||||| |||||
Sbjct: 245 actggtggaaacaagacaaaaac 267
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 400 attccttcagatagcactcgtagaaagagtggtagaaggggtaggaggct 449
||||| || |||||||| || |||||||||||||||||||| || |||||
Sbjct: 272 attccctctgatagcacccgcagaaagagtggtagaaggggaagaaggct 321
>gnl|LJGI|BW600013 homologue to UniRef100_O22584 Cluster: 40S ribosomal protein S14;
n=1; Lupinus luteus|Rep: 40S ribosomal protein S14 -
Lupinus luteus (European yellow lupin), partial (52%)
Length = 465
Score = 206 bits (104), Expect = 9e-53
Identities = 185/212 (87%)
Strand = Plus / Plus
Query: 238 gttgctaccagatgcaaggagttgggcataacagctcttcatatcaggctccgcgcaact 297
|||||||||| |||||| || |||||||| ||| |||||||||||| |||||| || |||
Sbjct: 103 gttgctaccatatgcaaagaattgggcattacaactcttcatatcaagctccgtgccact 162
Query: 298 ggcggaaacaagaccaaaacacctggtccaggtgctcaagctgctctccgtgctttggct 357
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| | |||
Sbjct: 163 ggtggaaacaagacaaaaactcctggtcctggtgctcaggctgctctccgtgcccttgct 222
Query: 358 cggtctggaatgaaaatcggtcgcatagaggatgtgaccccaattccttcagatagcact 417
|| || ||||||||||| |||||||||||||||||||| || ||||| || ||||||||
Sbjct: 223 cgttcaggaatgaaaattggtcgcatagaggatgtgactcctattccctctgatagcacc 282
Query: 418 cgtagaaagagtggtagaaggggtaggaggct 449
|| |||||||||||||||||||| || |||||
Sbjct: 283 cgcagaaagagtggtagaaggggaagaaggct 314