Miyakogusa Predicted Gene

Lj4g3v0254260.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0254260.1 Non Chatacterized Hit- tr|I3SHP0|I3SHP0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; ATPASE, AAA FAMILY
P,NODE_52760_length_491_cov_142.425659.path2.1
         (423 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58903 similar to UniRef100_A7Q129 Cluster: Chromosome...   839   0.0  

>gnl|LJGI|TC58903 similar to UniRef100_A7Q129 Cluster: Chromosome chr10 scaffold_43,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_43, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (80%)
          Length = 1630

 Score =  839 bits (423), Expect = 0.0
 Identities = 423/423 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcgtagtatcgaatggtaatgtgcattccaaaaggtcatcggatatggcaatttac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atgagcgtagtatcgaatggtaatgtgcattccaaaaggtcatcggatatggcaatttac 285

                                                                       
Query: 61  gagcagcttcggagccaggggcagaatgggatccacacaaatgatgtttcaccaaacaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gagcagcttcggagccaggggcagaatgggatccacacaaatgatgtttcaccaaacaat 345

                                                                       
Query: 121 atggatgagaggccgcagaagtctttgcttccaccttttgaatctgcagaaatgcgtact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atggatgagaggccgcagaagtctttgcttccaccttttgaatctgcagaaatgcgtact 405

                                                                       
Query: 181 ttagcagagagcttaagtagggatatcattcgtgggagtccagatgtgaagtgggaaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttagcagagagcttaagtagggatatcattcgtgggagtccagatgtgaagtgggaaagc 465

                                                                       
Query: 241 ataaaggggctggagaatgcaaaacgcttacttaaagaagctgttgtaatgccaattaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ataaaggggctggagaatgcaaaacgcttacttaaagaagctgttgtaatgccaattaaa 525

                                                                       
Query: 301 tatcccaagtactttactggtttgttatcaccatggaagggaattctcctttttggcccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tatcccaagtactttactggtttgttatcaccatggaagggaattctcctttttggcccc 585

                                                                       
Query: 361 ccagggacaggaaagacaatgcttgcaaaggcagttgcaacagagtgcaagactacattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ccagggacaggaaagacaatgcttgcaaaggcagttgcaacagagtgcaagactacattt 645

              
Query: 421 ttt 423
           |||
Sbjct: 646 ttt 648