Miyakogusa Predicted Gene
- Lj4g3v0244120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0244120.1 tr|Q1I184|Q1I184_PEA WD-40 repeat protein
OS=Pisum sativum GN=MSI1 PE=2 SV=1,94.12,0,WD40,WD40 repeat;
CAF1C_H4-bd,Histone-binding protein RBBP4; WD_REPEATS_1,WD40 repeat,
conserved sit,CUFF.46753.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58316 homologue to UniRef100_A8VFK7 Cluster: MSI1; n=... 1459 0.0
gnl|LJGI|TC75390 homologue to UniRef100_A8VFK7 Cluster: MSI1; n=... 795 0.0
>gnl|LJGI|TC58316 homologue to UniRef100_A8VFK7 Cluster: MSI1; n=1; Glycine max|Rep:
MSI1 - Glycine max (Soybean), partial (58%)
Length = 839
Score = 1459 bits (736), Expect = 0.0
Identities = 739/740 (99%)
Strand = Plus / Plus
Query: 1 atggggaaagaggacgaagagatgcgaggcgagatcgaagagaggctaatcaacgaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggggaaagaggacgaagagatgcgaggcgagatcgaagagaggctaatcaacgaagag 159
Query: 61 tacaagatttggaagaagaacagtcccttcctctacgacctcgtcatcacccacgctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tacaagatttggaagaagaacagtcccttcctctacgacctcgtcatcacccacgctctc 219
Query: 121 gaatggccttccctcaccgtcgaatggctcccggaccgccacgaaccaccggggaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaatggccttccctcaccgtcgaatggctcccggaccgccacgaaccaccggggaaagat 279
Query: 181 tactctctgcagaaggtcatcctcggaacccacacctccgagaacgaacccaactacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tactctctgcagaaggtcatcctcggaacccacacctccgagaacgaacccaactacctc 339
Query: 241 atgctcgcacaggtccagcttcctctccatgactccgagaacgacgcgcgtcactacgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 atgctcgcacaggtccagcttcctctccatgactccgagaacgacgcgcgtcactacgac 399
Query: 301 gacgacctcggcggcttcggttgcgccaacgggaaggtgcagatcattcagcagatcaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gacgacctcggcggcttcggttgcgccaacgggaaggtgcagatcattcagcagatcaac 459
Query: 361 catgatggagaagttaatcgggccagatatatgccgcagaatccttttattatcgccacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 catgatggagaagttaatcgggccagatatatgccgcagaatccttttattatcgccacc 519
Query: 421 aagacgattagtgctgaggtttatgtgtttgattacagtaagcatccgtcgaagccgccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aagacgattagtgctgaggtttatgtgtttgattacagtaagcatccgtcgaagccgccg 579
Query: 481 cttgatgggtcttgcaaccctgatcttaggttgagagggcataatactgaagggtatggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cttgatgggtcttgcaaccctgatcttaggttgagagggcataatactgaagggtatggg 639
Query: 541 ttgtcgtggagtaagtttaaggaagggcatttgcttagtgggtctgatgatgctcagatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttgtcgtggagtaagtttaaggaagggcatttgcttagtgggtctgatgatgctcagatt 699
Query: 601 tgcttgtgggatattaatgggggtactccgaagaataaatcgctcgacgcgatgcagatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tgcttgtgggatattaatgggggtactccgaagaataaatcgctcgacgcgatgcagatt 759
Query: 661 tttaaggtacatgaaggggtggtggaggatgtggcttggcatttgaggcacgagtacttg 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 760 tttaaggtacatgaaggggtggtggaggatgtggcttggcatttgaggcacgagtactgg 819
Query: 721 tttggttctgttggggatga 740
||||||||||||||||||||
Sbjct: 820 tttggttctgttggggatga 839
>gnl|LJGI|TC75390 homologue to UniRef100_A8VFK7 Cluster: MSI1; n=1; Glycine max|Rep:
MSI1 - Glycine max (Soybean), partial (35%)
Length = 767
Score = 795 bits (401), Expect = 0.0
Identities = 401/401 (100%)
Strand = Plus / Plus
Query: 818 aggttaactgcttggctttcaatccctttaatgaatgggttgttgctactggttctactg 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggttaactgcttggctttcaatccctttaatgaatgggttgttgctactggttctactg 60
Query: 878 ataaaactgtgaagttatttgatctgcgcaagatcagttgtgctcttcactcctttgata 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataaaactgtgaagttatttgatctgcgcaagatcagttgtgctcttcactcctttgata 120
Query: 938 gtcacaaggaggaggttttccaggttggctggaatccaaagaatgagactattttggctt 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcacaaggaggaggttttccaggttggctggaatccaaagaatgagactattttggctt 180
Query: 998 cttgttgtcttggtaggagactcatggtgtgggatcttagcaggattgatgaggagcaga 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgttgtcttggtaggagactcatggtgtgggatcttagcaggattgatgaggagcaga 240
Query: 1058 cgccagaagatgcagaagatggtccaccagagttgctctttattcatggtggtcatacaa 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgccagaagatgcagaagatggtccaccagagttgctctttattcatggtggtcatacaa 300
Query: 1118 gtaaaatatctgatttctcttggaatccatgtgaagattgggttgttgctagtgtggctg 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaaaatatctgatttctcttggaatccatgtgaagattgggttgttgctagtgtggctg 360
Query: 1178 aagacaacatacttcaaatatggcagatggcagagaatata 1218
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagacaacatacttcaaatatggcagatggcagagaatata 401