Miyakogusa Predicted Gene

Lj4g3v0244110.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0244110.1 Non Chatacterized Hit- tr|D5A9U7|D5A9U7_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,37.63,2e-18,seg,NULL,CUFF.46748.1
         (963 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO037340 similar to UniRef100_A7P2Q2 Cluster: Chromosom...   436   e-121
gnl|LJGI|GO027216 similar to UniRef100_A7P2Q2 Cluster: Chromosom...   325   3e-88

>gnl|LJGI|GO037340 similar to UniRef100_A7P2Q2 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (48%)
          Length = 547

 Score =  436 bits (220), Expect = e-121
 Identities = 223/224 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcttgcaccagaagagcttcaattcctctccatcacaacaatcttaaccgaatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  atggatcttgcaccagaagagcttcaattcctctccatcacaacaatcttaaccgaatca 135

                                                                       
Query: 61  atctcaatccccaaacgatcccctaaaaccttctacctcatcaccctcaccctcatcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atctcaatccccaaacgatcccctaaaaccttctacctcatcaccctcaccctcatcttt 195

                                                                       
Query: 121 cctctcagcttcgcaatcctcgctcactctctcttcacacaccccatcatatcccagctt 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cctctcagcttcgcaatccccgctcactctctcttcacacaccccatcatatcccagctt 255

                                                       
Query: 181 caatcccctttcgatgacccttctcaaaccacccacgaatggac 224
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caatcccctttcgatgacccttctcaaaccacccacgaatggac 299



 Score =  363 bits (183), Expect = 1e-99
 Identities = 186/187 (99%)
 Strand = Plus / Plus

                                                                       
Query: 286 acagcagctgttgttttcactgtcgcatcgctctacacttcaaagcctgtgtccttttcc 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acagcagctgttgttttcactgtcgcatcgctctacacttcaaagcctgtgtccttttcc 420

                                                                       
Query: 346 tacaccatctctgctataccgaaagttttcaagcgcttgttcattactttcctctgggtg 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaccatctctgctataccgaaagttttcaagcgcttgttcattactttcctctgggtg 480

                                                                       
Query: 406 tctctgttgatgattatctacaactttgttttcgtgctttctcttattcttctcatcatt 465
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 481 tctctgttgatgattatctacaaccttgttttcgtgctttctcttattcttctcatcatt 540

                  
Query: 466 gcgttgg 472
           |||||||
Sbjct: 541 gcgttgg 547


>gnl|LJGI|GO027216 similar to UniRef100_A7P2Q2 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 515

 Score =  325 bits (164), Expect = 3e-88
 Identities = 164/164 (100%)
 Strand = Plus / Minus

                                                                       
Query: 549 tactgctttgtggcatttggctagtgtggtgtcggtgctggaaccgctttatggttttgc 608
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tactgctttgtggcatttggctagtgtggtgtcggtgctggaaccgctttatggttttgc 455

                                                                       
Query: 609 tgctatgaagaagagctatgagttgttgaaggggagggtcaggtatgctgcggttttggt 668
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tgctatgaagaagagctatgagttgttgaaggggagggtcaggtatgctgcggttttggt 395

                                                       
Query: 669 ttgtgggtatttggttatttgtgggattattggaggggcgttta 712
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttgtgggtatttggttatttgtgggattattggaggggcgttta 351



 Score =  262 bits (132), Expect = 4e-69
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                       
Query: 832 ttttactatgtgtgtaagagttatcatcatcaagggattgataagagtgccttgcatgac 891
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttttactatgtgtgtaagagttatcatcatcaagggattgataagagtgccttgcatgac 172

                                                                       
Query: 892 catcttggtggttaccttggagagtatgtgcctctcaagagcagcattcagatggagaat 951
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 catcttggtggttaccttggagagtatgtgcctctcaagagcagcattcagatggagaat 112

                       
Query: 952 ttggatgtatga 963
           ||||||||||||
Sbjct: 111 ttggatgtatga 100