Miyakogusa Predicted Gene

Lj4g3v0244090.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0244090.1 Non Chatacterized Hit- tr|I1NZF9|I1NZF9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,25.91,0.000000000004,ABC_TRANSPORTER_2,ABC transporter-like;
RNASE L INHIBITOR,NULL; ATP-BINDING TRANSPORT
PROTEIN-RELATE,CUFF.46738.1
         (888 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO036372 homologue to UniRef100_A7QKL9 Cluster: Chromos...   123   2e-27
gnl|LJGI|TC77727 weakly similar to UniRef100_A7QKL9 Cluster: Chr...    54   2e-06
gnl|LJGI|TC76895 weakly similar to UniRef100_A8J4L1 Cluster: Pre...    54   2e-06

>gnl|LJGI|GO036372 homologue to UniRef100_A7QKL9 Cluster: Chromosome chr2
           scaffold_113, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (29%)
          Length = 813

 Score =  123 bits (62), Expect = 2e-27
 Identities = 125/146 (85%)
 Strand = Plus / Plus

                                                                       
Query: 513 tccccagtttgtatcagatgttatggagccacttcttatcaatcagttaatggaccaaga 572
           ||||||| ||||||||||||||||| |||||||||||||| | || ||||||||||||||
Sbjct: 51  tccccagcttgtatcagatgttatgaagccacttcttatcgaacaattaatggaccaaga 110

                                                                       
Query: 573 agtcatggaactttcaagtgcagagttgcagaaacttgctctatgtctttgtcttggaaa 632
           |||  || | |||||  ||| ||||||||| | | ||||  ||||||||||||| |||||
Sbjct: 111 agttgtgaatctttctggtggagagttgcaaagagttgcattatgtctttgtctcggaaa 170

                                     
Query: 633 gccagctgacatctatgtgattgatg 658
           ||| |||||||||||| |||| ||||
Sbjct: 171 gcctgctgacatctatctgatagatg 196


>gnl|LJGI|TC77727 weakly similar to UniRef100_A7QKL9 Cluster: Chromosome chr2
           scaffold_113, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 841

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 513 tccccagtttgtatcagatgttatggagccacttcttatcaatcagttaatggaccaaga 572
           |||||| |||| |||| |||||||| ||||||||||||||  ||| || ||||||||| |
Sbjct: 175 tccccactttgaatcacatgttatgcagccacttcttatccctcacttcatggaccaaca 234

              
Query: 573 agt 575
           |||
Sbjct: 235 agt 237


>gnl|LJGI|TC76895 weakly similar to UniRef100_A8J4L1 Cluster: Predicted protein; n=1;
           Chlamydomonas reinhardtii|Rep: Predicted protein -
           Chlamydomonas reinhardtii, partial (27%)
          Length = 1418

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 513 tccccagtttgtatcagatgttatggagccacttcttatcaatcagttaatggaccaaga 572
           |||||| |||| |||| |||||||| ||||||||||||||  ||| || ||||||||| |
Sbjct: 663 tccccactttgaatcacatgttatgcagccacttcttatccctcacttcatggaccaaca 722

              
Query: 573 agt 575
           |||
Sbjct: 723 agt 725