Miyakogusa Predicted Gene
- Lj4g3v0243990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0243990.1 Non Chatacterized Hit- tr|I1K360|I1K360_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,92.09,0,FtsH,Peptidase, FtsH; no description,NULL; ATPases
associated with a variety of cellula,AAA+ ATPase ,CUFF.46752.1
(2070 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67783 homologue to UniRef100_A7PJL7 Cluster: Chromoso... 2987 0.0
gnl|LJGI|TC82227 homologue to UniRef100_A7PJL7 Cluster: Chromoso... 807 0.0
gnl|LJGI|BG662366 homologue to UniRef100_A7PJL7 Cluster: Chromos... 422 e-117
gnl|LJGI|AV779762 similar to UniRef100_A7PJL7 Cluster: Chromosom... 400 e-110
gnl|LJGI|TC74775 homologue to UniRef100_A7PJL7 Cluster: Chromoso... 260 3e-68
gnl|LJGI|BW622728 similar to UniRef100_A7PJL7 Cluster: Chromosom... 98 3e-19
gnl|LJGI|AV769332 similar to UniRef100_Q54F38 Cluster: Histone H... 70 6e-11
gnl|LJGI|TC67690 homologue to UniRef100_A7NVT2 Cluster: Chromoso... 64 4e-09
>gnl|LJGI|TC67783 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 1543
Score = 2987 bits (1507), Expect = 0.0
Identities = 1510/1511 (99%)
Strand = Plus / Plus
Query: 1 atggcagcatcatcagcatgtcttgttggtaatggtttatctacacggggtaacagaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atggcagcatcatcagcatgtcttgttggtaatggtttatctacacggggtaacagaatt 92
Query: 61 actctcggtaaggacttcaatggaagatatctattctcatcttggaggttgaacaaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 actctcggtaaggacttcaatggaagatatctattctcatcttggaggttgaacaaggca 152
Query: 121 ccaaaagcgttttcggtaaaggcgtctttagaccaaagccagaacggagggagaagggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ccaaaagcgttttcggtaaaggcgtctttagaccaaagccagaacggagggagaagggag 212
Query: 181 cttcttaagttgcttggaaatgtgggagttggattaccagcattattgggaggtggcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cttcttaagttgcttggaaatgtgggagttggattaccagcattattgggaggtggcaag 272
Query: 241 gcttatgctgacgaacaaggggtttcctcctccagaatgtcttattctaggtttctagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcttatgctgacgaacaaggggtttcctcctccagaatgtcttattctaggtttctagag 332
Query: 301 tatttggacaaggacagggttaacaaagtggatctgtatgagaatggaaccatagctatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tatttggacaaggacagggttaacaaagtggatctgtatgagaatggaaccatagctatt 392
Query: 361 gttgaggcagtttctcctgagttgggtaacaggttgcagcgtgttaaggttcaacttcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gttgaggcagtttctcctgagttgggtaacaggttgcagcgtgttaaggttcaacttcct 452
Query: 421 ggacttaaccaagagctccttcagaaattcagggaaaagaacattgactttgcagctcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggacttaaccaagagctccttcagaaattcagggaaaagaacattgactttgcagctcac 512
Query: 481 aatgctcaagaggattcaggttctcttttgtttaacctgattgggaatctggctttccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aatgctcaagaggattcaggttctcttttgtttaacctgattgggaatctggctttccct 572
Query: 541 ataatcttgattggagggttgttccttctcacgaggaggcccggtgggatgggaggtccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ataatcttgattggagggttgttccttctcacgaggaggcccggtgggatgggaggtccc 632
Query: 601 ggtggccctggatttcctcttactttcggtcaatctaaagccaagtttcagatggaacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggtggccctggatttcctcttactttcggtcaatctaaagccaagtttcagatggaacca 692
Query: 661 aacactggagtgacatttgatgatgttgccggggtggatgaagccaagcaggattttatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aacactggagtgacatttgatgatgttgccggggtggatgaagccaagcaggattttatg 752
Query: 721 gaagtggtggagtttctcaagaagcctgagaggtttactgctgtcggagctcgcatacct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaagtggtggagtttctcaagaagcctgagaggtttactgctgtcggagctcgcatacct 812
Query: 781 aaaggagttcttcttattggtcctcccggaactgggaagaccttgttagccaaggctatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 aaaggagttcttcttattggtcctcccggaactgggaagaccttgttagccaaggctatt 872
Query: 841 gccggtgaagccggagttccgtttttctcaatatctggttctgagtttgttgagatgttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gccggtgaagccggagttccgtttttctcaatatctggttctgagtttgttgagatgttt 932
Query: 901 gttggtgttggcgcttctcgagtccgtgatttgttcaagaaggccaaagagaatgcccct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gttggtgttggcgcttctcgagtccgtgatttgttcaagaaggccaaagagaatgcccct 992
Query: 961 tgcattgtctttgttgatgaaattgatgctgttgggagacaaagagggactggaattggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 tgcattgtctttgttgatgaaattgatgctgttgggagacaaagagggactggaattggt 1052
Query: 1021 ggagggaatgatgaaagagaacagaccctcaaccaacttttgacagaaatggatgggttt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ggagggaatgatgaaagagaacagaccctcaaccaacttttgacagaaatggatgggttt 1112
Query: 1081 gagggtaataccggtatcattgtcgttgctgcaactaacagggctgacattcttgactct 1140
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1113 gagggtaataccggtatcattgtcgttgctgcaactaacagggccgacattcttgactct 1172
Query: 1141 gccttactgagacctggccggtttgatagacaggtaatggttgatgttccggatgtaagg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 gccttactgagacctggccggtttgatagacaggtaatggttgatgttccggatgtaagg 1232
Query: 1201 ggaaggactgagatcctaaaggttcatggtagcaacaaaaagtttgaagctgatgtctct 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 ggaaggactgagatcctaaaggttcatggtagcaacaaaaagtttgaagctgatgtctct 1292
Query: 1261 cttgaaataattgcaatgagaacacctggttttagtggagctgatcttgcaaatctcttg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 cttgaaataattgcaatgagaacacctggttttagtggagctgatcttgcaaatctcttg 1352
Query: 1321 aacgaagctgctatattagctggtcggcgtggaaagacagggatttcatctaaagagatt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 aacgaagctgctatattagctggtcggcgtggaaagacagggatttcatctaaagagatt 1412
Query: 1381 gatgattctattgataggattgtagctggaatggaaggaacagtgatgacagatgggaag 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 gatgattctattgataggattgtagctggaatggaaggaacagtgatgacagatgggaag 1472
Query: 1441 agcaaaagtttagtggcatatcatgaagttgggcatgccatttgtggaactttgacccct 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 agcaaaagtttagtggcatatcatgaagttgggcatgccatttgtggaactttgacccct 1532
Query: 1501 ggtcatgatgc 1511
|||||||||||
Sbjct: 1533 ggtcatgatgc 1543
>gnl|LJGI|TC82227 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 545
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 1660 tttggtgagccagaggttacaactggagcagctggtgatttgcagcaaatcactggtttg 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggtgagccagaggttacaactggagcagctggtgatttgcagcaaatcactggtttg 60
Query: 1720 gcaaaacagatggtaaccacatttggaatgtctgatattggtccttggtcactcatggaa 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaaacagatggtaaccacatttggaatgtctgatattggtccttggtcactcatggaa 120
Query: 1780 gcagcacaaagtggagacgttatcatgagaatgatggcaaggaactcgatgtcagaaaag 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagcacaaagtggagacgttatcatgagaatgatggcaaggaactcgatgtcagaaaag 180
Query: 1840 cttgcagaagacattgatgctgctaccaagaggatctcagatgatgcatatgtaatcgca 1899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgcagaagacattgatgctgctaccaagaggatctcagatgatgcatatgtaatcgca 240
Query: 1900 ctgcgccatataagaaacaaccgcgaggcaattgacaagattgtggaagtccttctggag 1959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgcgccatataagaaacaaccgcgaggcaattgacaagattgtggaagtccttctggag 300
Query: 1960 aaagagacattgagtggagatgaattccgcgctatactctctgaatttgttgaaatccca 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagagacattgagtggagatgaattccgcgctatactctctgaatttgttgaaatccca 360
Query: 2020 gtagaaaatcgggttcctccttctaagacattagcagcaactgtttgaata 2070
|||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 gtagaaaatcgggttcctccttttaagacattagcagcaactgtttgaata 411
>gnl|LJGI|BG662366 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 439
Score = 422 bits (213), Expect = e-117
Identities = 383/439 (87%), Gaps = 3/439 (0%)
Strand = Plus / Plus
Query: 1578 tgacccaactttgatctcaaaacaacaactctttgcaagaattgttggagggttaggtgg 1637
|||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct: 1 tgacccaactctgatctccaaacaacaactctttgcaagaattgttggtggactaggtgg 60
Query: 1638 tagggctgcagaggaaataatttttggtgagccagaggttacaactggagcagctggtga 1697
|| || ||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct: 61 cagagcagcagaggaaattatttttggcgagcctgaggttacaactggagcagctggcga 120
Query: 1698 tttgcagcaaatcactggtttggcaaaacagatggtaaccacatttggaatgtctgatat 1757
|||||||||||| || || ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 121 tttgcagcaaataaccggcttggccaaacagatggtaaccacgtttggaatgtctgatat 180
Query: 1758 tggtccttggtcactcatgga---agcagcacaaagtggagacgttatcatgagaatgat 1814
||||||||||||||| ||||| | |||| || ||||| || || ||||||||||||||
Sbjct: 181 tggtccttggtcacttatggacacatcagctcagagtggtgatgtcatcatgagaatgat 240
Query: 1815 ggcaaggaactcgatgtcagaaaagcttgcagaagacattgatgctgctaccaagaggat 1874
|||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 241 ggcaagaaactcgatgtcagaaaggcttgccgaagacattgatgctgctgtcaagaggat 300
Query: 1875 ctcagatgatgcatatgtaatcgcactgcgccatataagaaacaaccgcgaggcaattga 1934
||||||||| || |||| |||||||||| |||||||| |||||||| || || || ||
Sbjct: 301 ctcagatgaagcgtatgaaatcgcactgaagcatataaggaacaaccgtgaagccatgga 360
Query: 1935 caagattgtggaagtccttctggagaaagagacattgagtggagatgaattccgcgctat 1994
||||||||||| ||| | |||||||| |||||| ||| ||||||||||||||| ||| |
Sbjct: 361 taagattgtggaggtcttactggagaaggagacaatgactggagatgaattccgagctct 420
Query: 1995 actctctgaatttgttgaa 2013
|| || || |||||||||
Sbjct: 421 cctgtccgagtttgttgaa 439
>gnl|LJGI|AV779762 similar to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 460
Score = 400 bits (202), Expect = e-110
Identities = 285/310 (91%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 1758 tggtccttggtcactcatggaagcagcacaaagtggagacgttatcatgagaatgatggc 1817
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 460 tggtccttggtcactcatggaagcagcaccaactggagacgttatcatgagaatgatggc 401
Query: 1818 aaggaactcgatgtcagaaaagcttgcagaagacattgatgctgctaccaagaggatctc 1877
|||| |||||||||| | |||||||||||||||| ||||| ||||| || ||||||||||
Sbjct: 400 aagggactcgatgtccgcaaagcttgcagaagaccttgattctgcttcccagaggatctc 341
Query: 1878 agatgatgcatatgtaatcgcactgcgccatataagaaacaaccgcgaggcaattgacaa 1937
|||||||||||||||||||||||||||||||||||| | |||||||||| | |||| |
Sbjct: 340 agatgatgcatatgtaatcgcactgcgccatataag-gtccaccgcgaggccagtgacca 282
Query: 1938 gattgtggaagtccttctggagaaagagacattgagtggagatgaattccgcgctatact 1997
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 281 gattgtggaagtccttctggagaaagagacattgactggagatggattccgcgctatact 222
Query: 1998 ctctgaatttgttgaaatccca-gtagaaaatcgggttcctccttctaagacattagcag 2056
||||| ||||| |||||||||| || | |||||||||||||||||||||||||||||| |
Sbjct: 221 ctctgtatttggtgaaatcccacgtcgcaaatcgggttcctccttctaagacattagccg 162
Query: 2057 caactgtttg 2066
| ||||||||
Sbjct: 161 ccactgtttg 152
>gnl|LJGI|TC74775 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 451
Score = 260 bits (131), Expect = 3e-68
Identities = 262/305 (85%), Gaps = 3/305 (0%)
Strand = Plus / Plus
Query: 1741 tttggaatgtctgatattggtccttggtcactcatgga---agcagcacaaagtggagac 1797
|||||||||||||||||||||||||||||||| ||||| | |||| || ||||| ||
Sbjct: 3 tttggaatgtctgatattggtccttggtcacttatggacacatcagctcagagtggtgat 62
Query: 1798 gttatcatgagaatgatggcaaggaactcgatgtcagaaaagcttgcagaagacattgat 1857
|| |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||
Sbjct: 63 gtcatcatgagaatgatggcaagaaactcgatgtcagaaaggcttgccgaagacattgat 122
Query: 1858 gctgctaccaagaggatctcagatgatgcatatgtaatcgcactgcgccatataagaaac 1917
|||||| |||||||||||||||||| || |||| |||||||||| |||||||| |||
Sbjct: 123 gctgctgtcaagaggatctcagatgaagcgtatgaaatcgcactgaagcatataaggaac 182
Query: 1918 aaccgcgaggcaattgacaagattgtggaagtccttctggagaaagagacattgagtgga 1977
||||| || || || || ||||||||||| ||| | |||||||| |||||| ||| ||||
Sbjct: 183 aaccgtgaagccatggataagattgtggaggtcttactggagaaggagacaatgactgga 242
Query: 1978 gatgaattccgcgctatactctctgaatttgttgaaatcccagtagaaaatcgggttcct 2037
||||||||||| ||| | || || || ||||||||||| |||| ||||||||||| |||
Sbjct: 243 gatgaattccgagctctcctgtccgagtttgttgaaattccagctgaaaatcgggtccct 302
Query: 2038 ccttc 2042
|||||
Sbjct: 303 ccttc 307
>gnl|LJGI|BW622728 similar to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 479
Score = 97.6 bits (49), Expect = 3e-19
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 199 aatgtgggagttggattaccagcattattgggaggtggcaaggcttatgctgacgaacaa 258
|||||||||||||| ||||| |||||||| ||| ||| || |||||||| || || ||
Sbjct: 338 aatgtgggagttggcttacctgcattattaggaaatgggaaagcttatgcggatgagcag 397
Query: 259 ggggtttcctcctccagaatgtcttattctaggtttctagagtatttggacaaggacagg 318
||| |||| |||||| ||||||||||||| |||||| ||||||||||| ||||| ||
Sbjct: 398 gggatttctccctccaaaatgtcttattctcagtttcttgagtatttggataaggataga 457
Query: 319 gttaacaaagtggatct 335
||||| |||||||||||
Sbjct: 458 gttaaaaaagtggatct 474
>gnl|LJGI|AV769332 similar to UniRef100_Q54F38 Cluster: Histone H3 domain-containing
protein; n=1; Dictyostelium discoideum|Rep: Histone H3,
partial (2%)
Length = 180
Score = 69.9 bits (35), Expect = 6e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 2016 cccagtagaaaatcgggttcctccttctaagacattagcagcaactgtttgaata 2070
||||||| ||||||||||||| |||| |||||||||| ||||||| |||||||||
Sbjct: 180 cccagtaaaaaatcgggttcccccttttaagacattaacagcaacggtttgaata 126
>gnl|LJGI|TC67690 homologue to UniRef100_A7NVT2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1861
Score = 63.9 bits (32), Expect = 4e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 961 tgcattgtctttgttgatgaaattgatgctgttgggagacaaagagggactggaattggt 1020
|||||||| || ||||||| ||||||||||||||||| || |||||| | || | |||
Sbjct: 20 tgcattgtgttcattgatgagattgatgctgttgggaggcagagaggggcggggctcggt 79
Query: 1021 ggagggaatgatgaaagagaacagaccctcaaccaacttttgacagaaatggatgg 1076
|| ||||||||||| || || ||||| | ||||| || |||||||| ||||||||
Sbjct: 80 ggtgggaatgatgagagggagcagacaattaaccagctcttgacagagatggatgg 135