Miyakogusa Predicted Gene
- Lj4g3v0243980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0243980.1 CUFF.46739.1
(1446 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV426912 similar to UniRef100_Q9FYJ8 Cluster: F17F8.1; ... 850 0.0
gnl|LJGI|AV422408 homologue to UniRef100_A7P2P2 Cluster: Chromos... 549 e-155
gnl|LJGI|TC80626 homologue to UniRef100_A7P2P2 Cluster: Chromoso... 486 e-136
>gnl|LJGI|AV426912 similar to UniRef100_Q9FYJ8 Cluster: F17F8.1; n=1; Arabidopsis
thaliana|Rep: F17F8.1 - Arabidopsis thaliana (Mouse-ear
cress), partial (27%)
Length = 429
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 185 cgagaattgatcggattattcgttgttcgctacgatctcaagggctgccggcagctgcga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgagaattgatcggattattcgttgttcgctacgatctcaagggctgccggcagctgcga 60
Query: 245 ttgaaccggtgccggagagcagcgtgtcgacggtggatgagagaacccatgaggaacggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaccggtgccggagagcagcgtgtcgacggtggatgagagaacccatgaggaacggg 120
Query: 305 agagatggtggaaaatggggttgaaggcaatctccgatggcaagttagcggtgttgcttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagatggtggaaaatggggttgaaggcaatctccgatggcaagttagcggtgttgcttc 180
Query: 365 tatccggtggccaggggactaggcttggaagctcagatccaaaaggatgtttcaatattg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatccggtggccaggggactaggcttggaagctcagatccaaaaggatgtttcaatattg 240
Query: 425 gacttccatctggaaaatctctttttcatctgcaagctgagagaattttgtgtgcacaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacttccatctggaaaatctctttttcatctgcaagctgagagaattttgtgtgcacaga 300
Query: 485 gactagcagctcatgctactgagagttctgcttcttcagtgcaaatacactggtacataa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gactagcagctcatgctactgagagttctgcttcttcagtgcaaatacactggtacataa 360
Query: 545 tgactagtccattcactgatgaggcaacacgcaaattctttgaaagtcataaattttttg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgactagtccattcactgatgaggcaacacgcaaattctttgaaagtcataaattttttg 420
Query: 605 gtcttgaag 613
|||||||||
Sbjct: 421 gtcttgaag 429
>gnl|LJGI|AV422408 homologue to UniRef100_A7P2P2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (26%)
Length = 343
Score = 549 bits (277), Expect = e-155
Identities = 333/343 (97%), Gaps = 9/343 (2%)
Strand = Plus / Plus
Query: 788 acattgatttctatggagttgacaatgcattggttcgagttgctgatccatcttttttag 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acattgatttctatggagttgacaatgcattggttcgagttgctgatccatcttttttag 60
Query: 848 gttactttattgataaaggtgtagctgctgctg-caaa-agt-tgt-tcgcaagg---ca 900
||||||||||||||||||||||||||||||||| |||| ||| ||| |||||| | ||
Sbjct: 61 gttactttattgataaaggtgtagctgctgctgncaaacagtatgtatcgcaaagggaca 120
Query: 901 tat-ccacaag-aaaaggttggtgtgtttgtacgacgaggtaaaggtggtcctcttactg 958
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tataccacaagcaaaaggttggtgtgtttgtacgacgaggtaaaggtggtcctcttactg 180
Query: 959 tagttgaatacagcgagttggacccatcactagcttctgcagttaatcaaggaactggcc 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagttgaatacagcgagttggacccatcactagcttctgcagttaatcaaggaactggcc 240
Query: 1019 gtcttcgtttttgttggagtaatgtctgcttacacatgttcactttggattttctaaacc 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcttcgtttttgttggagtaatgtctgcttacacatgttcactttggattttctaaacc 300
Query: 1079 aagtggcaaatagtcttgaaaaagacagcatttaccatcttgc 1121
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagtggcaaatagtcttgaaaaagacagcatttaccatcttgc 343
>gnl|LJGI|TC80626 homologue to UniRef100_A7P2P2 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (24%)
Length = 526
Score = 486 bits (245), Expect = e-136
Identities = 245/245 (100%)
Strand = Plus / Plus
Query: 1202 ctccaacgactgcactttttgagatattacgagaggaggaatttgcacctgtaaaaaatg 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctccaacgactgcactttttgagatattacgagaggaggaatttgcacctgtaaaaaatg 60
Query: 1262 caaatggatctaattatgacactccagacagtgcgaaactgcttgttcttcgactccaca 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaatggatctaattatgacactccagacagtgcgaaactgcttgttcttcgactccaca 120
Query: 1322 ctcgttgggtaattgctgctggcggtttcttgacacattcagtgcccttatatgcaactg 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcgttgggtaattgctgctggcggtttcttgacacattcagtgcccttatatgcaactg 180
Query: 1382 gtgttgaagtctcaccactctgttcatatgctggtgaaaacctggaacctatatgtcgag 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgttgaagtctcaccactctgttcatatgctggtgaaaacctggaacctatatgtcgag 240
Query: 1442 gaaga 1446
|||||
Sbjct: 241 gaaga 245