Miyakogusa Predicted Gene
- Lj4g3v0217750.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0217750.2 Non Chatacterized Hit- tr|I1K373|I1K373_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57912 PE,88.6,0,Hect, E3
ligase catalytic domain,HECT; seg,NULL; HECT,HECT; HECT DOMAIN
UBIQUITIN-PROTEIN LIGASE,NUL,CUFF.46803.2
(2925 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80380 homologue to UniRef100_A7Q998 Cluster: Chromoso... 1300 0.0
gnl|LJGI|TC79446 homologue to UniRef100_A7Q998 Cluster: Chromoso... 944 0.0
gnl|LJGI|BP057693 homologue to UniRef100_Q8GY23 Cluster: E3 ubiq... 145 2e-33
gnl|LJGI|AW164063 homologue to UniRef100_A7NUJ7 Cluster: Chromos... 80 9e-14
>gnl|LJGI|TC80380 homologue to UniRef100_A7Q998 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 656
Score = 1300 bits (656), Expect = 0.0
Identities = 656/656 (100%)
Strand = Plus / Plus
Query: 1632 gtgcgatggccttgttacatttacaaggtttgctgagaagcatcgccgactttcaaatgc 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcgatggccttgttacatttacaaggtttgctgagaagcatcgccgactttcaaatgc 60
Query: 1692 tttcattagacaaaatccaagtttgttggagaaatcactttccatgatgctcaaggcacc 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcattagacaaaatccaagtttgttggagaaatcactttccatgatgctcaaggcacc 120
Query: 1752 aaggctgattgactttgataacaagagagcctatttccgctcaagaatcaggaatcaaca 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggctgattgactttgataacaagagagcctatttccgctcaagaatcaggaatcaaca 180
Query: 1812 tgatcagcacttgtctgggccactgcgtataagtgtaaggcgggcatacattttggagga 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatcagcacttgtctgggccactgcgtataagtgtaaggcgggcatacattttggagga 240
Query: 1872 ctcatataaccagttaaggatgcgacctactcaggatctcaaggggcgattaaatgtgca 1931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcatataaccagttaaggatgcgacctactcaggatctcaaggggcgattaaatgtgca 300
Query: 1932 atttcaaggtgaagagggtattgatgctggtggactcaccagagaatggtaccagcttct 1991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttcaaggtgaagagggtattgatgctggtggactcaccagagaatggtaccagcttct 360
Query: 1992 atcaagggtcatatttgacaagggtgctttacttttcaccacagtgggcaacaatgcgac 2051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcaagggtcatatttgacaagggtgctttacttttcaccacagtgggcaacaatgcgac 420
Query: 2052 tttccaacctaaccctaattcagtttaccaaactgaacatctctcatacttcaagtttgt 2111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttccaacctaaccctaattcagtttaccaaactgaacatctctcatacttcaagtttgt 480
Query: 2112 gggccgagtggtggggaaggctctattcgatgggcaactattggatgtttacttcactcg 2171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggccgagtggtggggaaggctctattcgatgggcaactattggatgtttacttcactcg 540
Query: 2172 atctttctataagcatatacttggtgtcaaggttacataccatgatattgaagcagttga 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atctttctataagcatatacttggtgtcaaggttacataccatgatattgaagcagttga 600
Query: 2232 tcctgattattataagaatttgaagtggatgctggagaatgatgtgagcgatattc 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcctgattattataagaatttgaagtggatgctggagaatgatgtgagcgatattc 656
>gnl|LJGI|TC79446 homologue to UniRef100_A7Q998 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 517
Score = 944 bits (476), Expect = 0.0
Identities = 492/496 (99%), Gaps = 1/496 (0%)
Strand = Plus / Plus
Query: 2430 agctggacatatactgacaaatgccatccgtcctcaaatcaattcctttctggaaggttt 2489
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 11 agctggacatatactgacaaatgccatccgtccttaa-tcaattcctttctggaaggttt 69
Query: 2490 taatgaattggtaccgcgagaacttatatccatctttaatgacaaggagcttgagctact 2549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 taatgaattggtaccgcgagaacttatatccatctttaatgacaaggagcttgagctact 129
Query: 2550 cattagtggtctcccagaaattgatttggatgacttgaaggccaacactgagtatacagg 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cattagtggtctcccagaaattgatttggatgacttgaaggccaacactgagtatacagg 189
Query: 2610 gtatacagtggcatcaaatgttgttcaatggttttgggaggtggtcaaaactttcaacaa 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gtatacagtggcatcaaatgttgttcaatggttttgggaggtggtcaaaactttcaacaa 249
Query: 2670 agaagacatggcaagattgctgcaatttgtgactggaacatcgaaggttcctttggaggg 2729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agaagacatggcaagattgctgcaatttgtgactggaacatcgaaggttcctttggaggg 309
Query: 2730 ttttaaggccgtgcaaggcatctctggtccacaaaggtttcagattcacaaggcatatgg 2789
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 310 ttttaaggccttgcaaggcatctctggtcctcaaaggtttcagattcacaaggcatatgg 369
Query: 2790 agctcctgatcgactgccatctgctcatacatgcttcaaccaactagaccttccagagta 2849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agctcctgatcgactgccatctgctcatacatgcttcaaccaactagaccttccagagta 429
Query: 2850 tacctctaaggagcagcttcaagaacgtttgttgcttgccatccatgaggctagtgaagg 2909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tacctctaaggagcagcttcaagaacgtttgttgcttgccatccatgaggctagtgaagg 489
Query: 2910 gtttggttttggttga 2925
||||||||||||||||
Sbjct: 490 gtttggttttggttga 505
>gnl|LJGI|BP057693 homologue to UniRef100_Q8GY23 Cluster: E3 ubiquitin-protein ligase
UPL1; n=1; Arabidopsis thaliana|Rep: E3
ubiquitin-protein, partial (2%)
Length = 543
Score = 145 bits (73), Expect = 2e-33
Identities = 216/264 (81%)
Strand = Plus / Minus
Query: 2662 ttcaacaaagaagacatggcaagattgctgcaatttgtgactggaacatcgaaggttcct 2721
|||| ||||||||| ||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 543 ttcagcaaagaagatatggctagatttcttcaatttgtcactggaacatcaaaggttcct 484
Query: 2722 ttggagggttttaaggccgtgcaaggcatctctggtccacaaaggtttcagattcacaag 2781
||||| || || ||||| ||||||| || ||||| || ||||| || || || ||| |
Sbjct: 483 ttggaaggcttcaaggcactgcaaggtatttctggccctcaaagattacaaatccacnaa 424
Query: 2782 gcatatggagctcctgatcgactgccatctgctcatacatgcttcaaccaactagacctt 2841
||||||||||| || || || |||||||| ||||||||||| || ||||||||||||||
Sbjct: 423 gcatatggagccccagagcggctgccatcagctcatacatgttttaaccaactagacctc 364
Query: 2842 ccagagtatacctctaaggagcagcttcaagaacgtttgttgcttgccatccatgaggct 2901
|| |||||| |||||||| |||||||| ||||| || | ||||| || || || ||
Sbjct: 363 cctgagtatcaatctaaggaacagcttcaggaacgcctgctacttgcaattcacgaagcc 304
Query: 2902 agtgaagggtttggttttggttga 2925
|||||||| ||||| |||| ||||
Sbjct: 303 agtgaaggttttgggtttgcttga 280
>gnl|LJGI|AW164063 homologue to UniRef100_A7NUJ7 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 384
Score = 79.8 bits (40), Expect = 9e-14
Identities = 107/128 (83%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 2197 gtcaaggttacataccatgatattgaagcagttgatcctgattattataagaatttgaag 2256
||||| |||||||| | ||| |||||||| |||||||||| |||| ||| ||||||||
Sbjct: 1 gtcaaagttacatatcttga-attgaagccattgatcctgactattttaaaaatttgaaa 59
Query: 2257 tggatgctggagaatgatgtgagcgatattcctgaccttacatttagcatggatgctgat 2316
|||||||| ||||||||| | || ||| ||| || ||||| |||||||| ||||| |||
Sbjct: 60 tggatgcttgagaatgatatcagtgatgttctagatcttacttttagcattgatgcagat 119
Query: 2317 gaggaaaa 2324
||||||||
Sbjct: 120 gaggaaaa 127