Miyakogusa Predicted Gene

Lj4g3v0216630.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0216630.1 Non Chatacterized Hit- tr|K4CBD0|K4CBD0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,55.43,3e-19,
,CUFF.46702.1
         (313 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO029851 weakly similar to UniRef100_A7PXF9 Cluster: Ch...   109   1e-23

>gnl|LJGI|GO029851 weakly similar to UniRef100_A7PXF9 Cluster: Chromosome chr12
           scaffold_36, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 685

 Score =  109 bits (55), Expect = 1e-23
 Identities = 132/157 (84%), Gaps = 3/157 (1%)
 Strand = Plus / Minus

                                                                       
Query: 156 cattcttcaagctcccatgtcaatgctttcatgtgtctcccatcctcaggttaatgggcc 215
           |||||| || |||||||| ||||| || |||||||| || |||||||||| ||||||   
Sbjct: 349 cattctccatgctcccatatcaattctctcatgtgtgtctcatcctcaggctaatggtgt 290

                                                                       
Query: 216 tgatggggtttgggtaactggtggtgaattttcacagatttctgaaatgaattatctcat 275
            |||||||  |||||  ||||||   ||||||| |||||||||||||||||| || | ||
Sbjct: 289 agatggggcctgggtttctggtg---aattttctcagatttctgaaatgaatcatattat 233

                                                
Query: 276 ggtaagtgacagcatgagatatgcaattttgatgtag 312
           ||| | |||||||||||||||||||||||||||||||
Sbjct: 232 ggtgaatgacagcatgagatatgcaattttgatgtag 196