Miyakogusa Predicted Gene
- Lj4g3v0210330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0210330.1 Non Chatacterized Hit- tr|I1K3M7|I1K3M7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33440
PE,85.64,0,CHASE,CHASE; HisKA,Signal transduction histidine kinase,
subgroup 1, dimerisation/phosphoacceptor do,CUFF.46654.1
(1107 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60023 similar to UniRef100_Q000L4 Cluster: Histidine ... 317 8e-86
gnl|LJGI|BP052044 similar to UniRef100_A7QP43 Cluster: Chromosom... 218 6e-56
gnl|LJGI|TC66815 UniRef100_A3QVR9 Cluster: Histidine kinase 2; n... 68 1e-10
>gnl|LJGI|TC60023 similar to UniRef100_Q000L4 Cluster: Histidine kinase 1; n=1; Lupinus
albus|Rep: Histidine kinase 1 - Lupinus albus (White
lupin), partial (48%)
Length = 2350
Score = 317 bits (160), Expect = 8e-86
Identities = 166/168 (98%)
Strand = Plus / Plus
Query: 940 cgggcaattctggatgatgtgttgtcactattttctgagaagtctcgagcaaaaggatta 999
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 2 cgggcaattctggatgatgtgttgtcactattttctgagaagtctcaagtaaaaggatta 61
Query: 1000 gagttggcagtttttgtgtcagatcaggttcctgaactgctaataggtgatccaggaagg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gagttggcagtttttgtgtcagatcaggttcctgaactgctaataggtgatccaggaagg 121
Query: 1060 tttcgacaaataattacaaacctcatgggtaactcaattaagttcacg 1107
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttcgacaaataattacaaacctcatgggtaactcaattaagttcacg 169
>gnl|LJGI|BP052044 similar to UniRef100_A7QP43 Cluster: Chromosome chr1 scaffold_136,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_136, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 456
Score = 218 bits (110), Expect = 6e-56
Identities = 163/178 (91%), Gaps = 2/178 (1%)
Strand = Plus / Minus
Query: 599 cactccttattggacaaatttcctatgctactgtgattcaaattgcaaaagtagaagaag 658
|||||||| ||| |||||||||||||||| ||||| |||| ||||| |||||||||||||
Sbjct: 451 cactccttcttgcacaaatttcctatgcttctgtgcttcatattgccaaagtagaagaag 392
Query: 659 attaccgtcagatgatggagctaaaagaacgagctgaggcagctgatgttgcaaaatccc 718
|||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 391 attaccgtgagatgatggagctgaaagaacgagctgaggcagctgatgttgccaaatccc 332
Query: 719 ag-tttcttgctac-tgtttcccacgagatcagaacaccaatgaatggtgttttaggg 774
|| ||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||
Sbjct: 331 agctttcttgctacttgtctcccgtgagatcagaacacccatgaatggtgttttaggg 274
>gnl|LJGI|TC66815 UniRef100_A3QVR9 Cluster: Histidine kinase 2; n=1; Lotus
japonicus|Rep: Histidine kinase 2 - Lotus japonicus,
complete
Length = 2992
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 688 cgagctgaggcagctgatgttgcaaaatcccagtttcttgctactgtttcccacgagatc 747
||||| || |||||||||||||| || ||||||||||| ||||| || || || || ||
Sbjct: 1100 cgagcagaagcagctgatgttgccaagtcccagtttctagctacagtctctcatgaaatt 1159
Query: 748 agaacaccaatgaatggtgttttagg 773
||||||||||||||||| |||||||
Sbjct: 1160 agaacaccaatgaatggcattttagg 1185