Miyakogusa Predicted Gene
- Lj4g3v0200180.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0200180.2 Non Chatacterized Hit- tr|I1KRJ6|I1KRJ6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,77.92,0,POLYGALACTURONASE,Glycoside hydrolase, family 28; no
description,Pectin lyase fold; Glyco_hydro_28,G,CUFF.46646.2
(1197 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP060510 similar to UniRef100_Q2HZ18 Cluster: Polygalac... 478 e-134
gnl|LJGI|TC80723 similar to UniRef100_Q94EH4 Cluster: At1g48100/... 351 6e-96
gnl|LJGI|TC76551 similar to UniRef100_Q2HZ18 Cluster: Polygalact... 200 1e-50
>gnl|LJGI|BP060510 similar to UniRef100_Q2HZ18 Cluster: Polygalacturonase precursor;
n=1; Glycine max|Rep: Polygalacturonase precursor -
Glycine max (Soybean), partial (14%)
Length = 462
Score = 478 bits (241), Expect = e-134
Identities = 290/312 (92%), Gaps = 21/312 (6%)
Strand = Plus / Plus
Query: 1 atggatcatctcattcatggattacttattctctggattattactttgacacttttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggatcatctcattcatggattacttattctctggattattactttgacacttttcaac 231
Query: 61 cacaatttggtaaatgtggaaggaagataccaccatcttaccaaccagaagaatatatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 cacaatttggtaaatgtggaaggaagataccaccatcttaccaaccagaagaatatatcc 291
Query: 121 cctgctcctgatgaccctcctaatgatccttcccctgttcctaatgatccctcaccccct 180
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 292 cctgctcctgatgaccctcc---------------------taatgatccctcaccccct 330
Query: 181 tcaatttctcctagttttccttctgacccttatccaaatgatccccaagattcctcttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tcaatttctcctagttttccttctgacccttatccaaatgatccccaagattcctcttca 390
Query: 241 aatggtatctttgatgtgagatcctttggggctgttggagatggttcagctgatgacaca 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 391 aatggtatctttgatgtgagatccttnggggctgttggagatggttcagctgatgacaca 450
Query: 301 cctgcattcagg 312
||||||||||||
Sbjct: 451 cctgcattcagg 462
>gnl|LJGI|TC80723 similar to UniRef100_Q94EH4 Cluster: At1g48100/F21D18_17; n=1;
Arabidopsis thaliana|Rep: At1g48100/F21D18_17 -
Arabidopsis thaliana (Mouse-ear cress), partial (63%)
Length = 1183
Score = 351 bits (177), Expect = 6e-96
Identities = 558/685 (81%)
Strand = Plus / Plus
Query: 498 gtggcttgtcttttataaacttgaccaaatgacttttaatggtacaggaatcatagaagg 557
||||||||| ||||||| |||||| ||| | ||| ||||||| ||||||||||| |||||
Sbjct: 1 gtggcttgtgttttatagacttgatcaattcactcttaatgggacaggaatcattgaagg 60
Query: 558 caatggagaaaagtggtgggatctcccctgcaaacctcacaggggtccagatggaaaaac 617
|||||| ||| | ||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct: 61 caatggggaacaatggtgggatcttccttgcaaacctcacaggggtccagatgggaaaac 120
Query: 618 tttatcaagaccatgtgtcagtcccactatgataaggttcttcatgagctccaatttgaa 677
| ||| ||||||||| ||||| || ||||||||||||||| | |||||||| |||
Sbjct: 121 tacgtcaggaccatgtgggagtccaacaatgataaggttcttcctcagctccaacttgct 180
Query: 678 ggtgattggactgaaaattcaaaacagtcctgagttccacatgaaatttgatggctgcca 737
| ||| || |||| ||||||||||| || |||||| |||| ||||||||||||||
Sbjct: 181 gatgaggggtgtgaagattcaaaacagccccatgttccatgtgaagtttgatggctgcca 240
Query: 738 aggggtaatgattgatgatgtgtccatttcttcaccaaaactcagccccaacactgatgg 797
||| || ||| || || |||||||||||| | || |||||||||||||||||||||||
Sbjct: 241 aggagtgcggatcgacgaggtgtccatttctgcgccgaaactcagccccaacactgatgg 300
Query: 798 aatccatgtagaaaattcaaatgatgttgggatatataactccatgataagcaatggtga 857
|||||| ||| ||| | || | |||| ||| || ||| |||||||||||||||||||
Sbjct: 301 aatccacttaggaaacacgaagggtgtttcgatttacaacaccatgataagcaatggtga 360
Query: 858 tgattgcatttcaattggacccgggacctcaaacgtggacatagctggtgttacttgtgg 917
|||||| ||||||||||||||||| |||| | |||||||| ||| | |||||||
Sbjct: 361 tgattgtgtttcaattggacccgggtgctcagatgtggacattaatggattaacttgtgc 420
Query: 918 tcctagccatgggattagcattggaagccttggtgtgcacaattcccaggcatgtgtctc 977
||| | || || |||||||||||||||||||| ||| |||| || || || ||||||||
Sbjct: 421 tcccacacacggaattagcattggaagccttggagtggacaactcacatgcttgtgtctc 480
Query: 978 gaacttaactgttcgagacaccataataagggaatcagacaatggactcagaattaaaac 1037
||| ||||||| || | | | |||| ||||||||||||||| || || ||||| ||
Sbjct: 481 caacataactgtcagaaattctgtgataaaggaatcagacaatgggctgaggattaagac 540
Query: 1038 atggcaaggtgggacaggatctgtttcaggtttgagatttgagaacgtccaaatggagaa 1097
||||||||| || ||||| || || || ||||||||||||||| |||||||||||||
Sbjct: 541 atggcaaggaggtacaggttcagtgacaaacttgagatttgagaacatccaaatggagaa 600
Query: 1098 tgtgggaaactgcatcattgtagaccagtactactgcatgacaaaggaatgcctgaacca 1157
|||| | |||||||||| ||||||||||||||||| |||| || || ||| ||||||
Sbjct: 601 tgtgaggaactgcatcaacatagaccagtactactgcctgaccaaagagtgcaggaacca 660
Query: 1158 aacttcagctgttcatgttaatgat 1182
||| ||||| || ||||| ||||||
Sbjct: 661 aacatcagcagtacatgtaaatgat 685
>gnl|LJGI|TC76551 similar to UniRef100_Q2HZ18 Cluster: Polygalacturonase precursor;
n=1; Glycine max|Rep: Polygalacturonase precursor -
Glycine max (Soybean), partial (35%)
Length = 565
Score = 200 bits (101), Expect = 1e-50
Identities = 146/161 (90%)
Strand = Plus / Plus
Query: 262 tcctttggggctgttggagatggttcagctgatgacacacctgcattcagggcagcatgg 321
||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 397 tccttcggggcagttggagatggttcagctgatgacacggctgcattcagggaagcatgg 456
Query: 322 aaagccgcttgtgaagtagagtcaggggttgttctggctccagagaattactgctttatg 381
||||| ||||||| | |||||||||||||||||||||||||||| || ||||| ||||||
Sbjct: 457 aaagcagcttgtgcaatagagtcaggggttgttctggctccagaaaactactgttttatg 516
Query: 382 atcacttcaactattttttcaggtccatgcaagccaggact 422
|||||||| || |||||||| ||||||||||||||| ||||
Sbjct: 517 atcacttctacaattttttctggtccatgcaagccaagact 557