Miyakogusa Predicted Gene

Lj4g3v0200070.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0200070.1 tr|A9UWS1|A9UWS1_MONBE Predicted protein
OS=Monosiga brevicollis GN=7375 PE=4
SV=1,27.52,0.000000000007,seg,NULL; no description,Pectin lyase fold;
Pectin lyase-like,Pectin lyase fold/virulence factor,CUFF.46640.1
         (1500 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053226 weakly similar to UniRef100_A7P2N3 Cluster: Ch...   842   0.0  

>gnl|LJGI|BP053226 weakly similar to UniRef100_A7P2N3 Cluster: Chromosome chr1
            scaffold_5, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (38%)
          Length = 531

 Score =  842 bits (425), Expect = 0.0
 Identities = 438/444 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1057 gttcaagttcatgtcactaatgggctatttctaggggatgctaatgttttagtgaaatct 1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531  gttcaagttcatgtcactaatgggctatttctaggggatgctaatgttttagtgaaatct 472

                                                                        
Query: 1117 gtgaagggtcaagttttggggttaaacattgtgggtaatatgtttagtggtgatcctaat 1176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471  gtgaagggtcaagttttggggttaaacattgtgggtaatatgtttagtggtgatcctaat 412

                                                                        
Query: 1177 aagaaggttccaattgtgaagcttgatggggagtttagtaacattgatcaagtggtgatt 1236
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411  aagaaggttccnattgtgaagcttgatggggagtttagtaacattgatcaagtggtgatt 352

                                                                        
Query: 1237 gatagaaacaatgtgaatggcatggggttgagatcaaccgttggaaagttaactgtgagt 1296
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351  gatagaaacnatgtgaatggcatggggttgagatcaaccgttggaaagttaactgtgagt 292

                                                                        
Query: 1297 ggaaatgggacaaagtgggtggctgatttttcatcagttttggtgtttcctaatcggatt 1356
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291  ggaaatgggacnaagtgggtggctgatttttcatcagttttggtgtttcctaatcggatt 232

                                                                        
Query: 1357 agtcattttcagtattcattctatgctcaagaagagcctaagtttttagcacactctgtg 1416
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 231  agtcattttcagtattcattctatgctcnagaagagcctaagtttttagcacactctgtg 172

                                                                        
Query: 1417 accaatgtgtcagataatgtggtcattgtggagagtgagaaggaagctaaagggttggtc 1476
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171  accnatgtgtcagataatgtggtcattgtggagagtgagaaggaagctaaagggttggtc 112

                                    
Query: 1477 tcctttgtggtagaacaataagaa 1500
            |||||||||||||||| |||||||
Sbjct: 111  tcctttgtggtagaaccataagaa 88