Miyakogusa Predicted Gene
- Lj4g3v0190050.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0190050.2 Non Chatacterized Hit- tr|B8AEM4|B8AEM4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,61.8,1e-18,SUBFAMILY NOT NAMED,NULL; CCR4-NOT TRANSCRIPTION
COMPLEX RELATED,NULL; seg,NULL; ZF_RING_2,Zinc fing,CUFF.46637.2
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61927 similar to UniRef100_A7PD85 Cluster: Chromosome... 1959 0.0
gnl|LJGI|TC66005 similar to UniRef100_A7PD85 Cluster: Chromosome... 922 0.0
gnl|LJGI|FS344701 similar to UniRef100_A7PD85 Cluster: Chromosom... 626 e-179
>gnl|LJGI|TC61927 similar to UniRef100_A7PD85 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 1602
Score = 1959 bits (988), Expect = 0.0
Identities = 1031/1050 (98%), Gaps = 6/1050 (0%)
Strand = Plus / Plus
Query: 1 atggtttccgattcaatcgccgccgctccgattccctccgccgccaacaccaagaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atggtttccgattcaatcgccgccgctccgattccctccgccgccaacaccaagaaccct 250
Query: 61 ggcaagaagaagaggaccaataggtctgcgaaattgaagcagtataagattgatgcgcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggcaagaagaagaggaccaataggtctgcgaaattgaagcagtataagattgatgcgcgt 310
Query: 121 cgcgagcaatggcttaatcaaggtgcggttaagagcaaggggtgcaaggatggggtggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cgcgagcaatggcttaatcaaggtgcggttaagagcaaggggtgcaaggatggggtggat 370
Query: 181 gatgatggccatgcgctgccatcgccggctgcggggaagcagggtaagggctcgttgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gatgatggccatgcgctgccatcgccggctgcggggaagcagggtaagggctcgttgcag 430
Query: 241 cagcttgagatgaggcgagaaggtgatgaggatgatgggttgattcatcaagatagtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cagcttgagatgaggcgagaaggtgatgaggatgatgggttgattcatcaagatagtgat 490
Query: 301 tcggagtcgccgtctaacagtcccactagtcctgacttgtgtggtaatgattctgggacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcggagtcgccgtctaacagtcccactagtcctgacttgtgtggtaatgattctgggacg 550
Query: 361 agcttcactgggggtagcagtgggggaggtagcagcagcagcagtatcagttccagcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agcttcactgggggtagcagtgggggaggtagcagcagcagcagtatcagttccagcagt 610
Query: 421 gccgggtgcttctctgggtatatcactgaagtggacgaagaagtannnnnnnnnnnnnnn 480
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gccgggtgcttctctgggtatatcactgaagtggacgaagaagtagaggaggaggagg-- 668
Query: 481 nnnngcgatgatgaaggcttggatgattgggaggctgttgcagatgctttggccgccgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ----gcgatgatgaaggcttggatgattgggaggctgttgcagatgctttggccgccgat 724
Query: 541 gacaagaatcaatgcccttgttctgatttgcccccttcccatgatgagcatgttgggcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gacaagaatcaatgcccttgttctgatttgcccccttcccatgatgagcatgttgggcaa 784
Query: 601 actgttccgcctcgtgcagcggctaatgggtcggattccaattctaaacctgcgagtggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 actgttccgcctcgtgcagcggctaatgggtcggattccaattctaaacctgcgagtggt 844
Query: 661 agattggttccttggggctctggaaatgtccgagcttggagggctgatgatgcttttcgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agattggttccttggggctctggaaatgtccgagcttggagggctgatgatgcttttcgc 904
Query: 721 cctcagagtttgcccaatctttctaagcagcacagtatgccgaaccctgatcggtactgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 cctcagagtttgcccaatctttctaagcagcacagtatgccgaaccctgatcggtactgt 964
Query: 781 ggaggggttccctggtctcccaattctgcaccatcctcttgtcccatatgctttgaggat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ggaggggttccctggtctcccaattctgcaccatcctcttgtcccatatgctttgaggat 1024
Query: 841 cttgatttaactgacacgagttttttgccatgcctgtgtgggtttcggctttgcctcttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 cttgatttaactgacacgagttttttgccatgcctgtgtgggtttcggctttgcctcttc 1084
Query: 901 tgccacaagaggattctcgaggatgatggtcggtgtcctgggtgcaggaagccgtatgag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 tgccacaagaggattctcgaggatgatggtcggtgtcctgggtgcaggaagccgtatgag 1144
Query: 961 cgtgaacctgttgagacagaggcaagtgtggttggtggtagcttgactcttcggttggct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 cgtgaacctgttgagacagaggcaagtgtggttggtggtagcttgactcttcggttggct 1204
Query: 1021 cgctcatgtagcatgattgaaagggcttga 1050
||||||||||||||||||||||||||||||
Sbjct: 1205 cgctcatgtagcatgattgaaagggcttga 1234
>gnl|LJGI|TC66005 similar to UniRef100_A7PD85 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 675
Score = 922 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Plus
Query: 1 atggtttccgattcaatcgccgccgctccgattccctccgccgccaacaccaagaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atggtttccgattcaatcgccgccgctccgattccctccgccgccaacaccaagaaccct 231
Query: 61 ggcaagaagaagaggaccaataggtctgcgaaattgaagcagtataagattgatgcgcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ggcaagaagaagaggaccaataggtctgcgaaattgaagcagtataagattgatgcgcgt 291
Query: 121 cgcgagcaatggcttaatcaaggtgcggttaagagcaaggggtgcaaggatggggtggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cgcgagcaatggcttaatcaaggtgcggttaagagcaaggggtgcaaggatggggtggat 351
Query: 181 gatgatggccatgcgctgccatcgccggctgcggggaagcagggtaagggctcgttgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gatgatggccatgcgctgccatcgccggctgcggggaagcagggtaagggctcgttgcag 411
Query: 241 cagcttgagatgaggcgagaaggtgatgaggatgatgggttgattcatcaagatagtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cagcttgagatgaggcgagaaggtgatgaggatgatgggttgattcatcaagatagtgat 471
Query: 301 tcggagtcgccgtctaacagtcccactagtcctgacttgtgtggtaatgattctgggacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcggagtcgccgtctaacagtcccactagtcctgacttgtgtggtaatgattctgggacg 531
Query: 361 agcttcactgggggtagcagtgggggaggtagcagcagcagcagtatcagttccagcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agcttcactgggggtagcagtgggggaggtagcagcagcagcagtatcagttccagcagt 591
Query: 421 gccgggtgcttctctgggtatatcactgaagtggacgaagaagta 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gccgggtgcttctctgggtatatcactgaagtggacgaagaagta 636
>gnl|LJGI|FS344701 similar to UniRef100_A7PD85 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 656
Score = 626 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Plus
Query: 141 aggtgcggttaagagcaaggggtgcaaggatggggtggatgatgatggccatgcgctgcc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aggtgcggttaagagcaaggggtgcaaggatggggtggatgatgatggccatgcgctgcc 400
Query: 201 atcgccggctgcggggaagcagggtaagggctcgttgcagcagcttgagatgaggcgaga 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atcgccggctgcggggaagcagggtaagggctcgttgcagcagcttgagatgaggcgaga 460
Query: 261 aggtgatgaggatgatgggttgattcatcaagatagtgattcggagtcgccgtctaacag 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aggtgatgaggatgatgggttgattcatcaagatagtgattcggagtcgccgtctaacag 520
Query: 321 tcccactagtcctgacttgtgtggtaatgattctgggacgagcttcactgggggtagcag 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tcccactagtcctgacttgtgtggtaatgattctgggacgagcttcactgggggtagcag 580
Query: 381 tgggggaggtagcagcagcagcagtatcagttccagcagtgccgggtgcttctctgggta 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tgggggaggtagcagcagcagcagtatcagttccagcagtgccgggtgcttctctgggta 640
Query: 441 tatcactgaagtggac 456
||||||||||||||||
Sbjct: 641 tatcactgaagtggac 656
Score = 285 bits (144), Expect = 3e-76
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 1 atggtttccgattcaatcgccgccgctccgattccctccgccgccaacaccaagaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggtttccgattcaatcgccgccgctccgattccctccgccgccaacaccaagaaccct 180
Query: 61 ggcaagaagaagaggaccaataggtctgcgaaattgaagcagtataagattgatgcgcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcaagaagaagaggaccaataggtctgcgaaattgaagcagtataagattgatgcgcgt 240
Query: 121 cgcgagcaatggcttaatcaaggt 144
||||||||||||||||||||||||
Sbjct: 241 cgcgagcaatggcttaatcaaggt 264