Miyakogusa Predicted Gene
- Lj4g3v0166400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0166400.1 Non Chatacterized Hit- tr|D7TAG1|D7TAG1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,67.95,0,coiled-coil,NULL; Remorin_C,Remorin, C-terminal; seg,NULL;
FAMILY NOT NAMED,NULL,CUFF.46592.1
(1527 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341233 similar to UniRef100_Q10SJ8 Cluster: Remorin, ... 1336 0.0
gnl|LJGI|TC82361 similar to UniRef100_A7PNI6 Cluster: Chromosome... 1142 0.0
>gnl|LJGI|FS341233 similar to UniRef100_Q10SJ8 Cluster: Remorin, C-terminal region
family protein, expressed; n=2; Oryza sativa Japonica
Group|Rep: Remorin, C-terminal region family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 690
Score = 1336 bits (674), Expect = 0.0
Identities = 674/674 (100%)
Strand = Plus / Plus
Query: 28 cagggtaatgggggattttcacctggaaagttgaggagcatgctactgggtgtggagaag 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 cagggtaatgggggattttcacctggaaagttgaggagcatgctactgggtgtggagaag 76
Query: 88 aagaggaaagaagaggaggaggttgattccactttcacccctggatctcaaaatccagac 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 aagaggaaagaagaggaggaggttgattccactttcacccctggatctcaaaatccagac 136
Query: 148 atggatgaatctggtggtagcagttctgatcattgtaaagatgtagatgttgtgagtgtc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atggatgaatctggtggtagcagttctgatcattgtaaagatgtagatgttgtgagtgtc 196
Query: 208 cttcctgattattcaacttctacagctcgcacttggagcatagagacagccggtggtgat 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cttcctgattattcaacttctacagctcgcacttggagcatagagacagccggtggtgat 256
Query: 268 cgcattgggaaggttaatgcaggaataacttctaagaatagaatccttgaagacccttct 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cgcattgggaaggttaatgcaggaataacttctaagaatagaatccttgaagacccttct 316
Query: 328 ttagattatgatagtgggcaggacaatatgagcatgtcctcatcggtgtttgaatttcaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttagattatgatagtgggcaggacaatatgagcatgtcctcatcggtgtttgaatttcaa 376
Query: 388 aaggctgagcgtgctcccccaagagtgcccgcggggccattctcaaagccagcgccatct 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaggctgagcgtgctcccccaagagtgcccgcggggccattctcaaagccagcgccatct 436
Query: 448 aaatgggatgatgcccagaaatggatagcgagtccaacatcaaacaggccaaagacagca 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaatgggatgatgcccagaaatggatagcgagtccaacatcaaacaggccaaagacagca 496
Query: 508 cagagccaggggcaaggcgggcatgggggaccgcgtaaagttggtagtcttggttatgga 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagagccaggggcaaggcgggcatgggggaccgcgtaaagttggtagtcttggttatgga 556
Query: 568 agccggcagtcttccatgaaggttgttgttgaagttccagatcaaagagaaattgcttta 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agccggcagtcttccatgaaggttgttgttgaagttccagatcaaagagaaattgcttta 616
Query: 628 gatgagccggatacaaagcaaatggatacagatcaaactaagatggacagtgaaggacat 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gatgagccggatacaaagcaaatggatacagatcaaactaagatggacagtgaaggacat 676
Query: 688 aagtttgcgagtta 701
||||||||||||||
Sbjct: 677 aagtttgcgagtta 690
>gnl|LJGI|TC82361 similar to UniRef100_A7PNI6 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 728
Score = 1142 bits (576), Expect = 0.0
Identities = 589/592 (99%), Gaps = 1/592 (0%)
Strand = Plus / Plus
Query: 936 tactcccacaagaacttcccctatgtcaactttaactgatccacatatcgacaacctgaa 995
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactcccacaagaacttccc-tatgtcaactttaactgatccacatatcgacaacctgaa 59
Query: 996 tctcaacaagagtgaattgtccgaaaaggagctacaaatgaaaaccaggcgagaaatcat 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tctcaacaagagtgaattgtccgaaaaggagctacaaatgaaaaccaggcgagaaatcat 119
Query: 1056 ggtcctcgggacacaactaggtaaaatgaatattgctgcctgggctagtaaagaagaaga 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ggtcctcgggacacaactaggtaaaatgaatattgctgcctgggctagtaaagaagaaga 179
Query: 1116 ggataaggatgcatccacttcactgaaagcaaaaacagctgatcaaccagctaagagtgt 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggataaggatgcatccacttcactgaaagcaaaaacagctgatcaaccagctaagagtgt 239
Query: 1176 cattgaagcacgtgcagcagcatgggaggaggctgagaaagccaagtatatggccagatt 1235
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 240 cattgaagcacgtgcggcagcatgggaggaggctgagaaagccaagtatatggccaggtt 299
Query: 1236 taggcgtgaggagatgaaaattcaggcatgggaaaatcatcagaaagcaaaaacagaagc 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taggcgtgaggagatgaaaattcaggcatgggaaaatcatcagaaagcaaaaacagaagc 359
Query: 1296 caagatgagaaaaattgaggtagaggttgaaagaatacggagcaagtcacatgataagct 1355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 caagatgagaaaaattgaggtagaggttgaaagaatacggagcaagtcacatgataagct 419
Query: 1356 gatgaataaattagcttctgcaaggcacaaggctgaggaaaagcgagcagcagcagaagc 1415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gatgaataaattagcttctgcaaggcacaaggctgaggaaaagcgagcagcagcagaagc 479
Query: 1416 caatagaaatcatcaagctgcaaaaactgaagagcaagcagaatacatacgaagaactgg 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caatagaaatcatcaagctgcaaaaactgaagagcaagcagaatacatacgaagaactgg 539
Query: 1476 tcatgttccttcctcatatttaacattctcttggtgcagttggtgctcttaa 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcatgttccttcctcatatttaacattctcttggtgcagttggtgctcttaa 591