Miyakogusa Predicted Gene
- Lj4g3v0166390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0166390.1 Non Chatacterized Hit- tr|A5B306|A5B306_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,33.33,5e-17,zinc finger,Zinc finger, CCCH-type; zf-CCCH,Zinc
finger, CCCH-type; CCCH zinc finger,NULL; ZF_C3H1,Z,CUFF.46591.1
(2100 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58921 similar to UniRef100_A7PNI7 Cluster: Chromosome... 1148 0.0
gnl|LJGI|TC63951 weakly similar to UniRef100_UPI0000141A8E Clust... 706 0.0
gnl|LJGI|AV780342 weakly similar to UniRef100_Q6VBJ3 Cluster: Ep... 264 2e-69
>gnl|LJGI|TC58921 similar to UniRef100_A7PNI7 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 791
Score = 1148 bits (579), Expect = 0.0
Identities = 579/579 (100%)
Strand = Plus / Plus
Query: 1 atggttgcccaacagccgcaacttcagattcagccaccgcagcctgcaccaccatctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atggttgcccaacagccgcaacttcagattcagccaccgcagcctgcaccaccatctgcc 272
Query: 61 caagatgaggccttgaagaggaacaccgattgtgtctactttcttgcatctcccttgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 caagatgaggccttgaagaggaacaccgattgtgtctactttcttgcatctcccttgaca 332
Query: 121 tgcaaaaagggcaatgaatgcgagtaccgccatagtgagtacgcccgggtcaatcctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tgcaaaaagggcaatgaatgcgagtaccgccatagtgagtacgcccgggtcaatcctagg 392
Query: 181 gattgctattattggttgaatggcaattgcttgaatcccaaatgttcatttcgccatccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gattgctattattggttgaatggcaattgcttgaatcccaaatgttcatttcgccatccg 452
Query: 241 ccccttgatggattgataggaaccccaactgcagctgccgctgctggcggaccatctgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccccttgatggattgataggaaccccaactgcagctgccgctgctggcggaccatctgta 512
Query: 301 ccccctccacaaattgcgacagcagctgcaacacacgctccttataattctgccaaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ccccctccacaaattgcgacagcagctgcaacacacgctccttataattctgccaaacaa 572
Query: 361 gctgtcccttgcattttcttccaaaaggggctttgcttaaaaggtgacagatgtgccttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gctgtcccttgcattttcttccaaaaggggctttgcttaaaaggtgacagatgtgccttc 632
Query: 421 ttgcatggaccaaatcctaccactagcagtaaagtagctactcagggcccgatggctagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ttgcatggaccaaatcctaccactagcagtaaagtagctactcagggcccgatggctagc 692
Query: 481 caaggatttgagaatccaagtcttaagaagccttttggtggcattgaaaaatatacacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 caaggatttgagaatccaagtcttaagaagccttttggtggcattgaaaaatatacacag 752
Query: 541 gaaaggaaaagttcccaaggaaatttttcaagctctgtt 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaaaggaaaagttcccaaggaaatttttcaagctctgtt 791
>gnl|LJGI|TC63951 weakly similar to UniRef100_UPI0000141A8E Cluster: tetra-peptide
repeat homeobox-like (TPRXL) on chromosome 3; n=1; Homo
sapiens|Rep: tetra-peptide repeat homeobox-like (TPRXL)
on chromosome 3 - Homo sapiens, partial (25%)
Length = 659
Score = 706 bits (356), Expect = 0.0
Identities = 356/356 (100%)
Strand = Plus / Plus
Query: 1745 aaaacactcaaaacggatcattgcccgtcaagagccatttgttagttaatgaagaagact 1804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaacactcaaaacggatcattgcccgtcaagagccatttgttagttaatgaagaagact 60
Query: 1805 ccacgactcaggtcactgatgcaattggaagagacagtgataacgttgatgttactcatg 1864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccacgactcaggtcactgatgcaattggaagagacagtgataacgttgatgttactcatg 120
Query: 1865 gtcaatcacctgaggatggaatgatctacgatgaagctgcagaggatcaggagtatgaag 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtcaatcacctgaggatggaatgatctacgatgaagctgcagaggatcaggagtatgaag 180
Query: 1925 gtgatgatgatcaaagagaaggggactatgattatgaccaagttgatgaggagggggagt 1984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgatgatgatcaaagagaaggggactatgattatgaccaagttgatgaggagggggagt 240
Query: 1985 acgagtatgaacaggttgatgagggtgagaatcaagagcaagaatacatggatgatgaag 2044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acgagtatgaacaggttgatgagggtgagaatcaagagcaagaatacatggatgatgaag 300
Query: 2045 aaggagatggggatggggatgactttgctaagaagattggcgttgttattacataa 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggagatggggatggggatgactttgctaagaagattggcgttgttattacataa 356
>gnl|LJGI|AV780342 weakly similar to UniRef100_Q6VBJ3 Cluster: Epa4p; n=1; Candida
glabrata|Rep: Epa4p - Candida glabrata (Yeast)
(Torulopsis glabrata), partial (3%)
Length = 469
Score = 264 bits (133), Expect = 2e-69
Identities = 151/157 (96%)
Strand = Plus / Minus
Query: 1944 aggggactatgattatgaccaagttgatgaggagggggagtacgagtatgaacaggttga 2003
|||||||||||||||||||| |||| ||||||||||||||||||||||||||| || |||
Sbjct: 469 aggggactatgattatgacccagttcatgaggagggggagtacgagtatgaaccggctga 410
Query: 2004 tgagggtgagaatcaagagcaagaatacatggatgatgaagaaggagatggggatgggga 2063
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 409 tgagggtgagaatcaagagccagaatacctggatgatgaagaaggagatggggatgggga 350
Query: 2064 tgactttgctaagaagattggcgttgttattacataa 2100
|||||||||||||||||||||||||||||||||||||
Sbjct: 349 tgactttgctaagaagattggcgttgttattacataa 313