Miyakogusa Predicted Gene
- Lj4g3v0166340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0166340.1 Non Chatacterized Hit- tr|I3SRC8|I3SRC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.66,0,seg,NULL;
FAMILY NOT NAMED,NULL; DUF1084,Domain of unknown function
DUF1084,CUFF.46595.1
(897 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63384 similar to UniRef100_Q402F3 Cluster: Tobamoviru... 1778 0.0
gnl|LJGI|TC76675 similar to UniRef100_Q402F2 Cluster: Tobamoviru... 609 e-173
gnl|LJGI|TC65855 homologue to UniRef100_Q402F3 Cluster: Tobamovi... 525 e-148
gnl|LJGI|TC73490 similar to UniRef100_Q402F3 Cluster: Tobamoviru... 276 2e-73
gnl|LJGI|BP051766 homologue to UniRef100_Q1PGA0 Cluster: Tobamov... 121 8e-27
>gnl|LJGI|TC63384 similar to UniRef100_Q402F3 Cluster: Tobamovirus multiplication 3;
n=1; Nicotiana tabacum|Rep: Tobamovirus multiplication 3
- Nicotiana tabacum (Common tobacco), partial (91%)
Length = 1406
Score = 1778 bits (897), Expect = 0.0
Identities = 897/897 (100%)
Strand = Plus / Plus
Query: 1 atggtggccagaggcgtgccggcgcaggtggcggttatggccgcggccgcccttaacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggtggccagaggcgtgccggcgcaggtggcggttatggccgcggccgcccttaacttc 169
Query: 61 accgaatcctcctcctcctccaactggtggcgagacatcaacaactctcccctttggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 accgaatcctcctcctcctccaactggtggcgagacatcaacaactctcccctttggcag 229
Query: 121 gatcgcatcttccacgtcctcgctgtcctctacggaatcgtagccgccatcgctctcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gatcgcatcttccacgtcctcgctgtcctctacggaatcgtagccgccatcgctctcgtt 289
Query: 181 caactagttcgaatacaattgagagttccggaatatggttggaccacgcagaaggtcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 caactagttcgaatacaattgagagttccggaatatggttggaccacgcagaaggtcttc 349
Query: 241 cactttctcaactttttcgtcaatggggttcggtgttttgttttcgtcttccgtcgcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cactttctcaactttttcgtcaatggggttcggtgttttgttttcgtcttccgtcgcgat 409
Query: 301 gtgcagaagctacagccagagattgtgcaacatatcttacttgacatgcccagtcttgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtgcagaagctacagccagagattgtgcaacatatcttacttgacatgcccagtcttgct 469
Query: 361 ttctttacaacgtatgcccttttggttctgttctgggctgagatttactatcaggcacgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttctttacaacgtatgcccttttggttctgttctgggctgagatttactatcaggcacgc 529
Query: 421 gctgtatctactgatggtctgagaccaagcttctacacaattaatgctgtggtttatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gctgtatctactgatggtctgagaccaagcttctacacaattaatgctgtggtttatgtt 589
Query: 481 gttcagattgttttgtggttgatattatggtggaaacccatcagtgtgctggtcatcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gttcagattgttttgtggttgatattatggtggaaacccatcagtgtgctggtcatcttg 649
Query: 541 tctaagatgttctttgcaggggtctctttgtttgcagcccttggctttcttctctatggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tctaagatgttctttgcaggggtctctttgtttgcagcccttggctttcttctctatggt 709
Query: 601 gggagattattcttgatgcttcaacgctttcctgtcgagtccaaaggtcgacgtaagaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gggagattattcttgatgcttcaacgctttcctgtcgagtccaaaggtcgacgtaagaag 769
Query: 661 ctgcaagaggttggctatgtgaccaccatatgtttttcatgcttccttatcagatgtgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ctgcaagaggttggctatgtgaccaccatatgtttttcatgcttccttatcagatgtgtt 829
Query: 721 atgatgtgcttcgatgcatttgataaagctgctgacctcgatgtcttggaccatcccatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 atgatgtgcttcgatgcatttgataaagctgctgacctcgatgtcttggaccatcccatt 889
Query: 781 ctaaacttcatatattacctgttggtggaaatattgccttcttctttggtccttttcatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 ctaaacttcatatattacctgttggtggaaatattgccttcttctttggtccttttcatt 949
Query: 841 ttgaggaagttaccccccaagcggggtatcacacaatatcacccgattcgctgaaag 897
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 ttgaggaagttaccccccaagcggggtatcacacaatatcacccgattcgctgaaag 1006
>gnl|LJGI|TC76675 similar to UniRef100_Q402F2 Cluster: Tobamovirus multiplication 1
homolog; n=1; Solanum lycopersicum|Rep: Tobamovirus
multiplication 1 homolog - Solanum lycopersicum (Tomato)
(Lycopersicon esculentum), partial (27%)
Length = 589
Score = 609 bits (307), Expect = e-173
Identities = 334/343 (97%)
Strand = Plus / Plus
Query: 1 atggtggccagaggcgtgccggcgcaggtggcggttatggccgcggccgcccttaacttc 60
|||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 247 atgggggccagaggcgtgccggcgcaggggggggttatggccgcggccgcccttaacttc 306
Query: 61 accgaatcctcctcctcctccaactggtggcgagacatcaacaactctcccctttggcag 120
||||||||||||||||||||||| || || |||||||||||||||||||||||||| ||
Sbjct: 307 accgaatcctcctcctcctccaagggggggagagacatcaacaactctcccctttgggag 366
Query: 121 gatcgcatcttccacgtcctcgctgtcctctacggaatcgtagccgccatcgctctcgtt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 367 gatcgcatcttccacgtcctcgctgtcctctacggaatcgtacccgccatcgctctcgtt 426
Query: 181 caactagttcgaatacaattgagagttccggaatatggttggaccacgcagaaggtcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 caactagttcgaatacaattgagagttccggaatatggttggaccacgcagaaggtcttc 486
Query: 241 cactttctcaactttttcgtcaatggggttcggtgttttgttttcgtcttccgtcgcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cactttctcaactttttcgtcaatggggttcggtgttttgttttcgtcttccgtcgcgat 546
Query: 301 gtgcagaagctacagccagagattgtgcaacatatcttacttg 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gtgcagaagctacagccagagattgtgcaacatatcttacttg 589
>gnl|LJGI|TC65855 homologue to UniRef100_Q402F3 Cluster: Tobamovirus multiplication
3; n=1; Nicotiana tabacum|Rep: Tobamovirus
multiplication 3 - Nicotiana tabacum (Common tobacco),
partial (49%)
Length = 693
Score = 525 bits (265), Expect = e-148
Identities = 397/441 (90%)
Strand = Plus / Plus
Query: 455 acacaattaatgctgtggtttatgttgttcagattgttttgtggttgatattatggtgga 514
||||||| |||| ||||||||||| | |||||||| |||||||||||||| |||||||||
Sbjct: 2 acacaatcaatgttgtggtttatgctattcagattattttgtggttgatactatggtgga 61
Query: 515 aacccatcagtgtgctggtcatcttgtctaagatgttctttgcaggggtctctttgtttg 574
|||| |||||| || ||||| |||||||| ||||||| ||||| ||||||||||||
Sbjct: 62 aaccggtcagtgcacttgtcattctgtctaagttgttcttcgcaggaatctctttgtttg 121
Query: 575 cagcccttggctttcttctctatggtgggagattattcttgatgcttcaacgctttcctg 634
||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 122 cagcccttggctttcttctctatggcggaagattattctttatgctgcaacgctttcctg 181
Query: 635 tcgagtccaaaggtcgacgtaagaagctgcaagaggttggctatgtgaccaccatatgtt 694
| || ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 182 ttgaatccaaaggtagacgtaagaagctgcaagaggttggctatgtgacaaccatatgtt 241
Query: 695 tttcatgcttccttatcagatgtgttatgatgtgcttcgatgcatttgataaagctgctg 754
||| || |||||| ||||||| ||||||||||||| |||||||||||||| ||| |
Sbjct: 242 ttttgtgtttccttgtcagatgcattatgatgtgctttaatgcatttgataaaaatgcgg 301
Query: 755 acctcgatgtcttggaccatcccattctaaacttcatatattacctgttggtggaaatat 814
|||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 302 accttgatgtcttggaccatcctattctgaacttcatatattacctgttggtggaaatat 361
Query: 815 tgccttcttctttggtccttttcattttgaggaagttaccccccaagcggggtatcacac 874
||||||||||||||||||||||||||||||||||| | || |||||||| ||||||||||
Sbjct: 362 tgccttcttctttggtccttttcattttgaggaagcttccacccaagcgtggtatcacac 421
Query: 875 aatatcacccgattcgctgaa 895
|||||||||| ||||||||||
Sbjct: 422 aatatcacccaattcgctgaa 442
>gnl|LJGI|TC73490 similar to UniRef100_Q402F3 Cluster: Tobamovirus multiplication 3;
n=1; Nicotiana tabacum|Rep: Tobamovirus multiplication 3
- Nicotiana tabacum (Common tobacco), partial (48%)
Length = 552
Score = 276 bits (139), Expect = 2e-73
Identities = 349/419 (83%)
Strand = Plus / Plus
Query: 84 ctggtggcgagacatcaacaactctcccctttggcaggatcgcatcttccacgtcctcgc 143
||||||||| ||||||||| ||||||| ||||||||| |||||||||| ||||||
Sbjct: 130 ctggtggcgtgacatcaacgactctccggcgtggcaggataccatcttccacaccctcgc 189
Query: 144 tgtcctctacggaatcgtagccgccatcgctctcgttcaactagttcgaatacaattgag 203
||||| ||||| |||| | ||| | ||||| ||||||| |||||||||||||||||
Sbjct: 190 cgtcctatacggcgtcgtttcagccgtagctctgattcaactggttcgaatacaattgag 249
Query: 204 agttccggaatatggttggaccacgcagaaggtcttccactttctcaactttttcgtcaa 263
|||||| || |||||||||||||||||||||||||| ||||||||||| | ||| || ||
Sbjct: 250 agttccagagtatggttggaccacgcagaaggtctttcactttctcaattgtttggtgaa 309
Query: 264 tggggttcggtgttttgttttcgtcttccgtcgcgatgtgcagaagctacagccagagat 323
||||||||| ||||| |||||| | ||| || ||||||||| | |||| ||||||||
Sbjct: 310 tggggttcgatgtttagttttcattttcttccggaatgtgcagaggttacacccagagat 369
Query: 324 tgtgcaacatatcttacttgacatgcccagtcttgctttctttacaacgtatgccctttt 383
| |||||||| ||||||| |||| |||||||| |||||||||||||| || || ||
Sbjct: 370 actccaacatatactacttgatgtgccgagtcttgcattctttacaacgtacgcactgtt 429
Query: 384 ggttctgttctgggctgagatttactatcaggcacgcgctgtatctactgatggtctgag 443
||| || ||||||||||||||||| || |||||||| || ||||| | |||||| ||||
Sbjct: 430 ggtcctcttctgggctgagatttattaccaggcacgtgcagtatccagtgatggactgaa 489
Query: 444 accaagcttctacacaattaatgctgtggtttatgttgttcagattgttttgtggttga 502
|||||| || |||||||| |||| ||||||||||| | |||||||| ||||||||||||
Sbjct: 490 accaagtttttacacaatcaatgttgtggtttatgctattcagattattttgtggttga 548
>gnl|LJGI|BP051766 homologue to UniRef100_Q1PGA0 Cluster: Tobamovirus multiplication
3; n=1; Striga asiatica|Rep: Tobamovirus multiplication
3 - Striga asiatica (Asiatic witchweed) (Striga lutea),
partial (20%)
Length = 457
Score = 121 bits (61), Expect = 8e-27
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 489 tgttttgtggttgatattatggtggaaacccatcagtgtgctggtcatcttgtctaagat 548
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 25 tgtttngtggttgatattatggtggaaacccatcag-gtgctggtcatcttgtctaagat 83
Query: 549 gttctttgcagg 560
||||||||||||
Sbjct: 84 gttctttgcagg 95
Score = 101 bits (51), Expect = 7e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 555 tgcaggggtctctttgtttgcagcccttggctttcttctctatggtgggag 605
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgcaggggtctctttgtttgcagcccttggctttcttctctatggtgggag 252