Miyakogusa Predicted Gene
- Lj4g3v0166320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0166320.1 Non Chatacterized Hit- tr|I1KRN4|I1KRN4_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,90.34,0,PLP-dependent
transferases,Pyridoxal phosphate-dependent transferase, major domain;
GLUTAMATE DECARB,gene.g51725.t1.1
(1395 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate ... 751 0.0
gnl|LJGI|TC77619 weakly similar to UniRef100_A7P433 Cluster: Chr... 500 e-140
gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamat... 311 6e-84
gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxyla... 168 6e-41
>gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate decarboxylase 4a;
n=1; Brassica juncea|Rep: Glutamate decarboxylase 4a -
Brassica juncea (Leaf mustard) (Indian mustard), partial
(43%)
Length = 814
Score = 751 bits (379), Expect = 0.0
Identities = 542/595 (91%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 1 atgccagaaaactctatgccaaaggaatcagcataccagaacatacacgatgagctgcag 60
|||||||| ||||||||||||||| | | ||||||||||||||||||||||||||| ||
Sbjct: 220 atgccagagaactctatgccaaagaaggctgcataccagaacatacacgatgagctgaag 279
Query: 61 cttgatgctaatccaaagctgaacctggcttcctttgtaaccacatccatggaggaagag 120
|||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 280 cttgatgcgaatccaaagatgaacttggcttcctttgtaaccacatccatggaggaagaa 339
Query: 121 tgcaacaagctcataatggaatccatcaacaagaactatgttgatatggatgagtaccct 180
|| ||||||||||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 340 tgtaacaagctcatgatggaatccatcaacaagaactatgtagacatggatgagtaccct 399
Query: 181 attaccactgatctccataatcgatgtgtgaacatgattgcgcgtttgttccatgctgaa 240
|||||||||||| |||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 400 gctaccactgatcttcataatcgatgtgtaaacatgatagcacgtttgttccatgctgaa 459
Query: 241 attggagaaaatgagagcgcaatcggagcaggaaccgttggatcatccgaggccataatg 300
||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 460 attggagaaaatgagagtgcaattggagcaggaactgttggatcatctgaggccataatg 519
Query: 301 ctggcagggcttgccttcaagaagaggtggcagaacaagcgcaaagctgagggaaagccc 360
|||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 520 ctggcaggccttgccttcaagaagaggtggcagaacaagcgcaaggctgagggcaagccc 579
Query: 361 tgtgataagccaaacttggtcactggtgccaatgttcaggtttgttgggagaagtttgca 420
| ||||||||| ||| | ||||| ||||||||||| ||||| |||||| |||| |||||
Sbjct: 580 tatgataagcccaacattgtcacaggtgccaatgtgcaggtatgttggaagaaatttgct 639
Query: 421 aggtattttgaggtggagttgagggaagtgaaggtgagagaagggtactacgtgatggac 480
|| |||||||| ||||||||||| ||||||||| |||| ||||| ||||||||||||||
Sbjct: 640 agttattttgatgtggagttgagagaagtgaagctgagtgaaggcaactacgtgatggac 699
Query: 481 cctgccaaggccgttgagatggtggatgagaacacaatttgtgtggctgcaatcttaggt 540
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 700 cctgccaaggccgttgagatggtggatgaaaacacaatttgtgtggctgcaatcttgggt 759
Query: 541 tcaactta-caatggagaatttgaagatgtcaagctcttgaatgacctgttgcta 594
||||| | | ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 760 gcaactgagggagggagaatttgaagatctcaagctcttgaatgacctgttgcta 814
>gnl|LJGI|TC77619 weakly similar to UniRef100_A7P433 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 731
Score = 500 bits (252), Expect = e-140
Identities = 380/423 (89%), Gaps = 6/423 (1%)
Strand = Plus / Plus
Query: 865 aaaggttctagtcagatcattgctcaatattatcagctaattcgccttgggcatgagggg 924
||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct: 1 aaaggttctagtcagatcattgctcaatattatcagctaattcgcctaggcaaagagggg 60
Query: 925 tataagagcataatggagaactgcagagaaaatgctatggtgctgaaggaacgtttggag 984
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 61 tataagagcataatggagaactgcagagaaaatgctatggtggtgaaggaacgcttggaa 120
Query: 985 gagacaggatgctttaacatcctctcaaaggacaatggtgttcctgtggtggcattttct 1044
||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 121 aagattggatgctttaacatactctcaaaagacgatggtgttcctgtggtggcattttct 180
Query: 1045 ctgaaggacagaagccactatgatgagttcaagatatcagagatgttgcgccgccacggt 1104
||||||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||
Sbjct: 181 ttgaaggacagaagccgctatgatgagttcaagatatcaaagatgttgcgccgtctcggt 240
Query: 1105 tgggtagtgcccgcgtatccaatgccaccgggcgcacagcacatcaatgtgctccgtgtg 1164
||||||||||| || ||||||||||||||||| || ||||||||||||| |||||||||
Sbjct: 241 tgggtagtgccagcttatccaatgccaccgggtgctcagcacatcaatgcactccgtgtg 300
Query: 1165 gtggtcagggccgagttttcacgcacacttggtgaacgccttgtgcttgacattaaaaat 1224
||||||||||| || ||||||||||||||| |||| ||||||||||||| ||| |||||
Sbjct: 301 gtggtcagggctgatctttcacgcacacttgctgaatgccttgtgcttgatattgaaaat 360
Query: 1225 gtgatgcatgagcttcagaaacctcac------taccctgccaaaatgaccaacattagg 1278
||| ||||||||||| |||||| |||| ||||||||||||| || |||||||| |
Sbjct: 361 gtggtgcatgagcttgagaaacttcaccccaagtaccctgccaaaacgatcaacattaag 420
Query: 1279 gaa 1281
|||
Sbjct: 421 gaa 423
Score = 54.0 bits (27), Expect = 2e-06
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1333 gatgcacagagggaaatcattgctcaagaatccaacaagcgccagaaaatcatggctgcc 1392
||||||| ||| |||||||||||| |||||| || || | ||||||||||||||||||
Sbjct: 439 gatgcacgcaggaaaatcattgctccagaatcaaataaacttcagaaaatcatggctgcc 498
Query: 1393 tag 1395
|||
Sbjct: 499 tag 501
>gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamate decarboxylase; n=1;
Glycine max|Rep: Glutamate decarboxylase - Glycine max
(Soybean), partial (96%)
Length = 1776
Score = 311 bits (157), Expect = 6e-84
Identities = 529/653 (81%)
Strand = Plus / Plus
Query: 277 gttggatcatccgaggccataatgctggcagggcttgccttcaagaagaggtggcagaac 336
||||| ||||| |||||||||||| |||| || | || ||||| | | ||||||||||
Sbjct: 418 gttggctcatcagaggccataatgttggctggattggcattcaaaagaacgtggcagaac 477
Query: 337 aagcgcaaagctgagggaaagccctgtgataagccaaacttggtcactggtgccaatgtt 396
| | ||||| |||||||| ||| ||| ||||| ||| | ||||| || ||||| |||
Sbjct: 478 agaaggaaagcagagggaaaaccccatgacaagcccaacattgtcaccggagccaacgtt 537
Query: 397 caggtttgttgggagaagtttgcaaggtattttgaggtggagttgagggaagtgaaggtg 456
|||||||| |||||||| |||||||| || |||||||||||||||| || |||||| ||
Sbjct: 538 caggtttgctgggagaaatttgcaagatactttgaggtggagttgaaagaggtgaagctg 597
Query: 457 agagaagggtactacgtgatggaccctgccaaggccgttgagatggtggatgagaacaca 516
|| || || ||||| || ||||||||| ||||| || || |||| |||||||||||
Sbjct: 598 agtgagggatactatgtaatggaccctcaaaaggctgtggatttggtagatgagaacacc 657
Query: 517 atttgtgtggctgcaatcttaggttcaacttacaatggagaatttgaagatgtcaagctc 576
|||||||| ||||| || | ||||| || | |||||||| |||||||||||||||| |
Sbjct: 658 atttgtgttgctgctattcttggttccacattaaatggagagtttgaagatgtcaagcgc 717
Query: 577 ttgaatgacctgttgctagaaaagaacaagcaaactggatgggatacacctattcatgtt 636
|| ||||| || | | |||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 718 ttaaatgatcttctaattgaaaagaacaaggaaactggatgggacactcctattcatgtt 777
Query: 637 gatgctgctagtggtggctttattgctcctttcctttatccagagctggaatgggatttc 696
||||| |||||||| ||||| ||||| || || ||||||||||||| || ||||| ||
Sbjct: 778 gatgcagctagtggcggcttcattgccccgtttatttatccagagcttgagtgggacttt 837
Query: 697 agactgccattggtgaagagcatcaatgttagtggccacaagtatggacttgtttatgct 756
| | ||| | |||||||||||||| |||||||||||||||||||| || || ||||||
Sbjct: 838 cgcttaccactagtgaagagcatcaacgttagtggccacaagtatggtctagtctatgct 897
Query: 757 ggaattggatgggttttatggagaagcaaagaagacttgccagaagaccttgttttccac 816
|||||||| |||||| | ||||||| ||| || |||||||| || || || | |||||
Sbjct: 898 ggaattggttgggttatctggagaaacaaggaggacttgcctgaggaactcatcttccat 957
Query: 817 atcaattaccttggagcagaccaacctacattcaccctgaatttttctaaaggttctagt 876
||||| || || ||||| || ||||| || |||||||| || || || |||||||||||
Sbjct: 958 atcaactatctcggagctgatcaacccaccttcaccctcaacttctccaaaggttctagc 1017
Query: 877 cagatcattgctcaatattatcagctaattcgccttgggcatgaggggtataa 929
|| ||||| |||||||| || || |||||||||||||| ||||||| |||||
Sbjct: 1018 caaatcatagctcaatactaccaactaattcgccttggttatgagggctataa 1070
Score = 99.6 bits (50), Expect = 5e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 125 acaagctcataatggaatccatcaacaagaactatgttgatatggatgagtaccctatta 184
|||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||| |||
Sbjct: 275 acaagctcatcatggcttccattaacaagaactatgttgacatggatgagtaccctgtta 334
Query: 185 ccactgatctccataatcgatgtgtgaacatgat 218
|||| || || || ||||| ||||||||||||||
Sbjct: 335 ccaccgagcttcagaatcggtgtgtgaacatgat 368
>gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxylase 1; n=1; Lotus
japonicus|Rep: Glutamate decarboxylase 1 - Lotus
japonicus, partial (57%)
Length = 800
Score = 168 bits (85), Expect = 6e-41
Identities = 400/505 (79%)
Strand = Plus / Plus
Query: 125 acaagctcataatggaatccatcaacaagaactatgttgatatggatgagtaccctatta 184
|||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||| |||
Sbjct: 296 acaagctcatcatggcttccattaacaagaactatgttgacatggatgagtaccctgtta 355
Query: 185 ccactgatctccataatcgatgtgtgaacatgattgcgcgtttgttccatgctgaaattg 244
|||| || || || ||||| |||||||||||||| || | | | || |||| | |||
Sbjct: 356 ccaccgagcttcagaatcggtgtgtgaacatgatagcacatctttttaatgcaccacttg 415
Query: 245 gagaaaatgagagcgcaatcggagcaggaaccgttggatcatccgaggccataatgctgg 304
|||| ||| | ||| | || | || || ||||| ||||| |||||||||||| |||
Sbjct: 416 gagactctgatactgcagttggtgttggcactgttggctcatcagaggccataatgttgg 475
Query: 305 cagggcttgccttcaagaagaggtggcagaacaagcgcaaagctgagggaaagccctgtg 364
| || | || ||||| | | ||||||||||| | ||||| |||||||| ||| ||
Sbjct: 476 ctggattggcattcaaaagaacgtggcagaacagaaggaaagcagagggaaaaccccatg 535
Query: 365 ataagccaaacttggtcactggtgccaatgttcaggtttgttgggagaagtttgcaaggt 424
| ||||| ||| | ||||| || ||||| ||||||||||| |||||||| |||||||| |
Sbjct: 536 acaagcccaacattgtcaccggagccaacgttcaggtttgctgggagaaatttgcaagat 595
Query: 425 attttgaggtggagttgagggaagtgaaggtgagagaagggtactacgtgatggaccctg 484
| |||||||||||||||| || |||||| |||| || || ||||| || |||||||||
Sbjct: 596 actttgaggtggagttgaaagaggtgaagctgagtgagggatactatgtaatggaccctc 655
Query: 485 ccaaggccgttgagatggtggatgagaacacaatttgtgtggctgcaatcttaggttcaa 544
||||| || || |||| ||||||||||| |||||||| ||||| || | ||||| |
Sbjct: 656 aaaaggctgtggatttggtagatgagaacaccatttgtgttgctgctattcttggttcca 715
Query: 545 cttacaatggagaatttgaagatgtcaagctcttgaatgacctgttgctagaaaagaaca 604
| | |||||||| |||||||||||||||| ||| ||||| || | | ||||||||||
Sbjct: 716 cattaaatggagagtttgaagatgtcaagcgcttaaatgatcttctaattgaaaagaaca 775
Query: 605 agcaaactggatgggatacacctat 629
|| ||||||||||||| || |||||
Sbjct: 776 aggaaactggatgggacactcctat 800