Miyakogusa Predicted Gene
- Lj4g3v0166240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0166240.1 Non Chatacterized Hit- tr|C6TF12|C6TF12_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53739 PE,84.44,0,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; PLP-dependent t,CUFF.46669.1
(1467 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate ... 1312 0.0
gnl|LJGI|TC77619 weakly similar to UniRef100_A7P433 Cluster: Chr... 999 0.0
gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamat... 287 1e-76
gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxyla... 182 4e-45
>gnl|LJGI|TC69785 similar to UniRef100_Q6Q4I2 Cluster: Glutamate decarboxylase 4a;
n=1; Brassica juncea|Rep: Glutamate decarboxylase 4a -
Brassica juncea (Leaf mustard) (Indian mustard), partial
(43%)
Length = 814
Score = 1312 bits (662), Expect = 0.0
Identities = 687/694 (98%), Gaps = 1/694 (0%)
Strand = Plus / Plus
Query: 1 atgcacttcaccttggcttttccaaaaccagggtctgatctctgtcttcgctctaacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgcacttcaccttggcttttccaaaaccagggtctgatctctgtcttcgctctaacttt 180
Query: 61 gcttctcgttatgtcagggcttctcttcctaggttcagcatgccagagaactctatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcttctcgttatgtcagggcttctcttcctaggttcagcatgccagagaactctatgcca 240
Query: 121 aagaaggctgcataccagaacatacacgatgagctgaagcttgatgcgaatccaaagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagaaggctgcataccagaacatacacgatgagctgaagcttgatgcgaatccaaagatg 300
Query: 181 aacttggcttcctttgtaaccacatccatggaggaagaatgtaacaagctcatgatggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacttggcttcctttgtaaccacatccatggaggaagaatgtaacaagctcatgatggaa 360
Query: 241 tccatcaacaagaactatgtagacatggatgagtaccctgctaccactgatcttcataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccatcaacaagaactatgtagacatggatgagtaccctgctaccactgatcttcataat 420
Query: 301 cgatgtgtaaacatgatagcacgtttgttccatgctgaaattggagaaaatgagagtgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgatgtgtaaacatgatagcacgtttgttccatgctgaaattggagaaaatgagagtgca 480
Query: 361 attggagcaggaactgttggatcatctgaggccataatgctggcaggccttgccttcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attggagcaggaactgttggatcatctgaggccataatgctggcaggccttgccttcaag 540
Query: 421 aagaggtggcagaacaagcgcaaggctgagggcaagccctatgataagcccaacattgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagaggtggcagaacaagcgcaaggctgagggcaagccctatgataagcccaacattgtc 600
Query: 481 acaggtgccaatgtgcaggtatgttggaagaaatttgctagttattttgatgtggagttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaggtgccaatgtgcaggtatgttggaagaaatttgctagttattttgatgtggagttg 660
Query: 541 agagaagtgaagctgagtgaaggcaactacgtgatggaccctgccaaggccgttgagatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agagaagtgaagctgagtgaaggcaactacgtgatggaccctgccaaggccgttgagatg 720
Query: 601 gtggatgaaaacacaatttgtgtggctgcaatcttgggttcaactta-caatggagaatt 659
||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||
Sbjct: 721 gtggatgaaaacacaatttgtgtggctgcaatcttgggtgcaactgagggagggagaatt 780
Query: 660 tgaagatgtcaagctcttgaatgacctgttgcta 693
||||||| ||||||||||||||||||||||||||
Sbjct: 781 tgaagatctcaagctcttgaatgacctgttgcta 814
>gnl|LJGI|TC77619 weakly similar to UniRef100_A7P433 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 731
Score = 999 bits (504), Expect = 0.0
Identities = 504/504 (100%)
Strand = Plus / Plus
Query: 964 aaaggttctagtcagatcattgctcaatattatcagctaattcgcctaggcaaagagggg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaggttctagtcagatcattgctcaatattatcagctaattcgcctaggcaaagagggg 60
Query: 1024 tataagagcataatggagaactgcagagaaaatgctatggtggtgaaggaacgcttggaa 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataagagcataatggagaactgcagagaaaatgctatggtggtgaaggaacgcttggaa 120
Query: 1084 aagattggatgctttaacatactctcaaaagacgatggtgttcctgtggtggcattttct 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagattggatgctttaacatactctcaaaagacgatggtgttcctgtggtggcattttct 180
Query: 1144 ttgaaggacagaagccgctatgatgagttcaagatatcaaagatgttgcgccgtctcggt 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaaggacagaagccgctatgatgagttcaagatatcaaagatgttgcgccgtctcggt 240
Query: 1204 tgggtagtgccagcttatccaatgccaccgggtgctcagcacatcaatgcactccgtgtg 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggtagtgccagcttatccaatgccaccgggtgctcagcacatcaatgcactccgtgtg 300
Query: 1264 gtggtcagggctgatctttcacgcacacttgctgaatgccttgtgcttgatattgaaaat 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggtcagggctgatctttcacgcacacttgctgaatgccttgtgcttgatattgaaaat 360
Query: 1324 gtggtgcatgagcttgagaaacttcaccccaagtaccctgccaaaacgatcaacattaag 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggtgcatgagcttgagaaacttcaccccaagtaccctgccaaaacgatcaacattaag 420
Query: 1384 gaaaagaagagtgcatttgatgcacgcaggaaaatcattgctccagaatcaaataaactt 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaaagaagagtgcatttgatgcacgcaggaaaatcattgctccagaatcaaataaactt 480
Query: 1444 cagaaaatcatggctgcctagagt 1467
||||||||||||||||||||||||
Sbjct: 481 cagaaaatcatggctgcctagagt 504
>gnl|LJGI|TC57138 homologue to UniRef100_A8C8H3 Cluster: Glutamate decarboxylase; n=1;
Glycine max|Rep: Glutamate decarboxylase - Glycine max
(Soybean), partial (96%)
Length = 1776
Score = 287 bits (145), Expect = 1e-76
Identities = 625/787 (79%), Gaps = 9/787 (1%)
Strand = Plus / Plus
Query: 224 acaagctcatgatggaatccatcaacaagaactatgtagacatggatgagtaccctgcta 283
|||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||| ||
Sbjct: 275 acaagctcatcatggcttccattaacaagaactatgttgacatggatgagtaccctgtta 334
Query: 284 ccactgatcttcataatcgatgtgtaaacatgatagcacgtttgttccatgctgaaattg 343
|||| || ||||| ||||| ||||| ||||||||||||| | | || |||| | |||
Sbjct: 335 ccaccgagcttcagaatcggtgtgtgaacatgatagcacatctttttaatgcaccacttg 394
Query: 344 gagaaaatgagagtgcaattggagcaggaactgttggatcatctgaggccataatgctgg 403
|||| ||| | || |||| |||||||| ||||| |||||||||||| |||
Sbjct: 395 gagactctgatactg---ttggc------actgttggctcatcagaggccataatgttgg 445
Query: 404 caggccttgccttcaagaagaggtggcagaacaagcgcaaggctgagggcaagccctatg 463
| || | || ||||| | | ||||||||||| | || || ||||| || ||| |||
Sbjct: 446 ctggattggcattcaaaagaacgtggcagaacagaaggaaagcagagggaaaaccccatg 505
Query: 464 ataagcccaacattgtcacaggtgccaatgtgcaggtatgttggaagaaatttgctagtt 523
| ||||||||||||||||| || ||||| || ||||| || ||| |||||||||| || |
Sbjct: 506 acaagcccaacattgtcaccggagccaacgttcaggtttgctgggagaaatttgcaagat 565
Query: 524 attttgatgtggagttgagagaagtgaagctgagtgaaggcaactacgtgatggaccctg 583
| ||||| |||||||||| ||| |||||||||||||| || |||| || |||||||||
Sbjct: 566 actttgaggtggagttgaaagaggtgaagctgagtgagggatactatgtaatggaccctc 625
Query: 584 ccaaggccgttgagatggtggatgaaaacacaatttgtgtggctgcaatcttgggttcaa 643
||||| || || |||| ||||| ||||| |||||||| ||||| || | ||||| |
Sbjct: 626 aaaaggctgtggatttggtagatgagaacaccatttgtgttgctgctattcttggttcca 685
Query: 644 cttacaatggagaatttgaagatgtcaagctcttgaatgacctgttgctagnnnnnnnca 703
| | |||||||| |||||||||||||||| ||| ||||| || | | | ||
Sbjct: 686 cattaaatggagagtttgaagatgtcaagcgcttaaatgatcttctaattgaaaagaaca 745
Query: 704 agcaaactggatggggtacacctattcatgttgatgctgctagtggtggctttattgctc 763
|| |||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| |
Sbjct: 746 aggaaactggatgggacactcctattcatgttgatgcagctagtggcggcttcattgccc 805
Query: 764 ctttcatttatccagagctggaatgggatttcagactcccattggtgaagagcatcaatg 823
| || |||||||||||||| || ||||| || | | ||| | |||||||||||||| |
Sbjct: 806 cgtttatttatccagagcttgagtgggactttcgcttaccactagtgaagagcatcaacg 865
Query: 824 tcagtggccacaagtatggacttgtttatgccggaattggttgggttatatggagaagca 883
| ||||||||||||||||| || || ||||| ||||||||||||||||| ||||||| ||
Sbjct: 866 ttagtggccacaagtatggtctagtctatgctggaattggttgggttatctggagaaaca 925
Query: 884 aggaagacttgccagaagaacttgtcttccacattaattaccttggagctgaccaaccta 943
|||| |||||||| || ||||| ||||||| || || || || |||||||| ||||| |
Sbjct: 926 aggaggacttgcctgaggaactcatcttccatatcaactatctcggagctgatcaaccca 985
Query: 944 cattcaccttgaatttttctaaaggttctagtcagatcattgctcaatattatcagctaa 1003
| |||||| | || || || ||||||||||| || ||||| |||||||| || || ||||
Sbjct: 986 ccttcaccctcaacttctccaaaggttctagccaaatcatagctcaatactaccaactaa 1045
Query: 1004 ttcgcct 1010
|||||||
Sbjct: 1046 ttcgcct 1052
>gnl|LJGI|TC59495 UniRef100_Q684J8 Cluster: Glutamate decarboxylase 1; n=1; Lotus
japonicus|Rep: Glutamate decarboxylase 1 - Lotus
japonicus, partial (57%)
Length = 800
Score = 182 bits (92), Expect = 4e-45
Identities = 368/460 (80%)
Strand = Plus / Plus
Query: 224 acaagctcatgatggaatccatcaacaagaactatgtagacatggatgagtaccctgcta 283
|||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||| ||
Sbjct: 296 acaagctcatcatggcttccattaacaagaactatgttgacatggatgagtaccctgtta 355
Query: 284 ccactgatcttcataatcgatgtgtaaacatgatagcacgtttgttccatgctgaaattg 343
|||| || ||||| ||||| ||||| ||||||||||||| | | || |||| | |||
Sbjct: 356 ccaccgagcttcagaatcggtgtgtgaacatgatagcacatctttttaatgcaccacttg 415
Query: 344 gagaaaatgagagtgcaattggagcaggaactgttggatcatctgaggccataatgctgg 403
|||| ||| | |||| |||| | || |||||||| ||||| |||||||||||| |||
Sbjct: 416 gagactctgatactgcagttggtgttggcactgttggctcatcagaggccataatgttgg 475
Query: 404 caggccttgccttcaagaagaggtggcagaacaagcgcaaggctgagggcaagccctatg 463
| || | || ||||| | | ||||||||||| | || || ||||| || ||| |||
Sbjct: 476 ctggattggcattcaaaagaacgtggcagaacagaaggaaagcagagggaaaaccccatg 535
Query: 464 ataagcccaacattgtcacaggtgccaatgtgcaggtatgttggaagaaatttgctagtt 523
| ||||||||||||||||| || ||||| || ||||| || ||| |||||||||| || |
Sbjct: 536 acaagcccaacattgtcaccggagccaacgttcaggtttgctgggagaaatttgcaagat 595
Query: 524 attttgatgtggagttgagagaagtgaagctgagtgaaggcaactacgtgatggaccctg 583
| ||||| |||||||||| ||| |||||||||||||| || |||| || |||||||||
Sbjct: 596 actttgaggtggagttgaaagaggtgaagctgagtgagggatactatgtaatggaccctc 655
Query: 584 ccaaggccgttgagatggtggatgaaaacacaatttgtgtggctgcaatcttgggttcaa 643
||||| || || |||| ||||| ||||| |||||||| ||||| || | ||||| |
Sbjct: 656 aaaaggctgtggatttggtagatgagaacaccatttgtgttgctgctattcttggttcca 715
Query: 644 cttacaatggagaatttgaagatgtcaagctcttgaatga 683
| | |||||||| |||||||||||||||| ||| |||||
Sbjct: 716 cattaaatggagagtttgaagatgtcaagcgcttaaatga 755