Miyakogusa Predicted Gene
- Lj4g3v0153800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0153800.1 Non Chatacterized Hit- tr|D8RWL3|D8RWL3_SELML
Putative uncharacterized protein OS=Selaginella
moelle,35.62,2e-18,Senescence_reg,Senescence regulator;
seg,NULL,CUFF.46564.1
(600 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79771 similar to UniRef100_A7QZN8 Cluster: Chromosome... 1160 0.0
gnl|LJGI|TC70730 similar to UniRef100_A7QZN8 Cluster: Chromosome... 135 3e-31
gnl|LJGI|AV765428 similar to UniRef100_A7QZN8 Cluster: Chromosom... 101 5e-21
>gnl|LJGI|TC79771 similar to UniRef100_A7QZN8 Cluster: Chromosome chr10 scaffold_282,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_282, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 1206
Score = 1160 bits (585), Expect = 0.0
Identities = 598/601 (99%), Gaps = 1/601 (0%)
Strand = Plus / Plus
Query: 1 atggccaaaggtcgcaggttcagctccaaccgaa-ccgaacgtttgttgggaaccgccta 59
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 56 atggccaaaggtcgcaggttcagctccaaccgaagccgaacgtttgttgggaaccgccta 115
Query: 60 caccgcccaaggctccaccgtctccgtcaccgacccgtcggagttccgggaagaggatgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 caccgcccaaggctccaccgtctccgtcaccgacccgtcggagttccgggaagaggatgt 175
Query: 120 gtggtccacggcggaagaccacgacatgaatgtctaccacgacggcgattgggagtcacg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 gtggtccacggcggaagaccacgacatgaatgtctaccacgacggcgattgggagtcacg 235
Query: 180 tgccacgcatcgtgctcggaatcgtgagctggaggagcagcaccgccaattgggcggttt 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 236 tgccacgcatcgtgctcggaatcgtgagctggaggagcagcaccgccaatggggcggttt 295
Query: 240 gtcgatggcgtttgaggatccggcggggaggatgatgaccacggcaacgtcgtcgtcgag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtcgatggcgtttgaggatccggcggggaggatgatgaccacggcaacgtcgtcgtcgag 355
Query: 300 gatcgtgcagcagcaccagtaccaccggtcgcagcggcaccaccacgtggccacgtcagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gatcgtgcagcagcaccagtaccaccggtcgcagcggcaccaccacgtggccacgtcagc 415
Query: 360 gccggtgaacgttcccgattggagcaagatactccgggtcaactcggtggaatcgcttca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gccggtgaacgttcccgattggagcaagatactccgggtcaactcggtggaatcgcttca 475
Query: 420 cgacggtttcgacgatgacggtgataacgaaccggagatggttccgccgcacgagtactt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cgacggtttcgacgatgacggtgataacgaaccggagatggttccgccgcacgagtactt 535
Query: 480 ggcgcggagccggaaaatggcggcaaattcggttttcgagggcgttggccgcacgttgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 536 ggcgcggagccggaaaatggcggcaaattcggttttcgagggcgttggccgcacgctgaa 595
Query: 540 gggccgtgacatgagccgggttcgggatgctgtgtggagccagaccgggttcaatggctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gggccgtgacatgagccgggttcgggatgctgtgtggagccagaccgggttcaatggctg 655
Query: 600 a 600
|
Sbjct: 656 a 656
>gnl|LJGI|TC70730 similar to UniRef100_A7QZN8 Cluster: Chromosome chr10 scaffold_282,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_282, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1157
Score = 135 bits (68), Expect = 3e-31
Identities = 194/236 (82%)
Strand = Plus / Plus
Query: 358 gcgccggtgaacgttcccgattggagcaagatactccgggtcaactcggtggaatcgctt 417
|||||| ||||||| || || |||||||||||||||||||| ||||||| || |||||
Sbjct: 492 gcgccgatgaacgtgccggactggagcaagatactccgggttgactcggtcgagtcgctg 551
Query: 418 cacgacggtttcgacgatgacggtgataacgaaccggagatggttccgccgcacgagtac 477
|||| | ||||||| || ||| | ||| |||| | ||||||||||| ||||||
Sbjct: 552 cacggtgtggacgacgatctcgatgagagcgagttggaggttgttccgccgcatgagtac 611
Query: 478 ttggcgcggagccggaaaatggcggcaaattcggttttcgagggcgttggccgcacgttg 537
|||||||| ||||| || | |||||| |||||||||||| ||| || ||||| ||||||
Sbjct: 612 ttggcgcgcagccgtaagaaggcggcggattcggttttcgtgggagtgggccggacgttg 671
Query: 538 aagggccgtgacatgagccgggttcgggatgctgtgtggagccagaccgggttcaa 593
|||||||| ||| ||||||||||||| || || || ||||||||||||||||||||
Sbjct: 672 aagggccgggacttgagccgggttcgtgacgccgtttggagccagaccgggttcaa 727
>gnl|LJGI|AV765428 similar to UniRef100_A7QZN8 Cluster: Chromosome chr10 scaffold_282,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_282, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 422
Score = 101 bits (51), Expect = 5e-21
Identities = 73/79 (92%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 518 agggcgttggccgcacgttgaagggccgtgacatgagccgggttcgggatgctgtgtgga 577
||||||||||||||||||| ||||||||| |||| | ||||||| |||||| ||||||||
Sbjct: 417 agggcgttggccgcacgttaaagggccgt-acataaaccgggtttgggatgttgtgtgga 359
Query: 578 gccagaccgggttcaatgg 596
|||||||||||||||||||
Sbjct: 358 gccagaccgggttcaatgg 340