Miyakogusa Predicted Gene

Lj4g3v0151620.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0151620.1 tr|Q5QNL2|Q5QNL2_ORYSJ DNA polymerase delta p66
subunit-like OS=Oryza sativa subsp. japonica
GN=P045,38.14,7e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.46540.1
         (849 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV417787 weakly similar to UniRef100_A9IY28 Cluster: CR...   615   e-175
gnl|LJGI|TC57363 similar to UniRef100_A7P225 Cluster: Chromosome...   523   e-148
gnl|LJGI|TC68877 similar to UniRef100_A7P225 Cluster: Chromosome...   307   6e-83

>gnl|LJGI|AV417787 weakly similar to UniRef100_A9IY28 Cluster: CRISPR-associated
           protein, Cse1 family; n=1; Desulfatibacillum
           alkenivorans AK-01|Rep: CRISPR-associated protein, Cse1
           family - Desulfatibacillum alkenivorans AK-01, partial
           (4%)
          Length = 310

 Score =  615 bits (310), Expect = e-175
 Identities = 310/310 (100%)
 Strand = Plus / Plus

                                                                       
Query: 249 attagcaagcttttggggtcgtgcatctgcaaaatccaagccttgctctccgccagcaga 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attagcaagcttttggggtcgtgcatctgcaaaatccaagccttgctctccgccagcaga 60

                                                                       
Query: 309 aaatagtagcacggtttcaaatccttctgaagctactgaagttgcccaaacttgtgctca 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaatagtagcacggtttcaaatccttctgaagctactgaagttgcccaaacttgtgctca 120

                                                                       
Query: 369 tgaagtgagagatggtgacagtggtgatgatgattatcaagatatcgcctcaaaaagatc 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaagtgagagatggtgacagtggtgatgatgattatcaagatatcgcctcaaaaagatc 180

                                                                       
Query: 429 ttccaataggaaaaggagggttgtcttagatttctcagatgaagatgaagatgtcatcag 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccaataggaaaaggagggttgtcttagatttctcagatgaagatgaagatgtcatcag 240

                                                                       
Query: 489 tttagcatcacctgatttcccatataaaaagtcatctcaagattccagccaaaatgacaa 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttagcatcacctgatttcccatataaaaagtcatctcaagattccagccaaaatgacaa 300

                     
Query: 549 aagttcatca 558
           ||||||||||
Sbjct: 301 aagttcatca 310


>gnl|LJGI|TC57363 similar to UniRef100_A7P225 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 850

 Score =  523 bits (264), Expect = e-148
 Identities = 264/264 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggatcaactaagagtaacatagttcaccaacctccgaagcatataccacatgattcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgggatcaactaagagtaacatagttcaccaacctccgaagcatataccacatgattcg 646

                                                                       
Query: 61  atttttaatgttgatctcaaaccacagaatgtggtgaaagatgtcaagagtctaaacaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atttttaatgttgatctcaaaccacagaatgtggtgaaagatgtcaagagtctaaacaat 706

                                                                       
Query: 121 ggtatagggaatactgaagctgaagattacgccaataaaactactccagacaaaggaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ggtatagggaatactgaagctgaagattacgccaataaaactactccagacaaaggaagg 766

                                                                       
Query: 181 gcccttcccttgcccacagacaaaaatattgtacaatctaacaaaaatggtcctgttact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gcccttcccttgcccacagacaaaaatattgtacaatctaacaaaaatggtcctgttact 826

                                   
Query: 241 ggtggttcattagcaagcttttgg 264
           ||||||||||||||||||||||||
Sbjct: 827 ggtggttcattagcaagcttttgg 850


>gnl|LJGI|TC68877 similar to UniRef100_A7P225 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 566

 Score =  307 bits (155), Expect = 6e-83
 Identities = 155/155 (100%)
 Strand = Plus / Plus

                                                                       
Query: 695 ggtcatcttctgaaaagtttcatagttctgcttctgaaatttgtgtaaataaggatagca 754
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggtcatcttctgaaaagtttcatagttctgcttctgaaatttgtgtaaataaggatagca 60

                                                                       
Query: 755 taaaaaatgctaccccaggttcacctaagaggaaaaaagtgatgaagaccaggattgatg 814
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taaaaaatgctaccccaggttcacctaagaggaaaaaagtgatgaagaccaggattgatg 120

                                              
Query: 815 aacgggggagagaagttactgaagtagtctgggag 849
           |||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgggggagagaagttactgaagtagtctgggag 155