Miyakogusa Predicted Gene
- Lj4g3v0147800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0147800.1 Non Chatacterized Hit- tr|I1KBY8|I1KBY8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33388 PE,75.35,0,no
description,Helix-loop-helix domain; BASIC HELIX-LOOP-HELIX (BHLH)
FAMILY PROTEIN,NULL; STEROL
RE,NODE_36109_length_1560_cov_43.597435.path2.1
(1011 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71238 weakly similar to UniRef100_Q45GJ7 Cluster: Exp... 910 0.0
gnl|LJGI|TC69651 homologue to UniRef100_A8TLW5 Cluster: BHLH tra... 644 0.0
gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH tran... 605 e-172
gnl|LJGI|TC61631 248 6e-65
gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome... 82 8e-15
gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome... 56 4e-07
gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH trans... 54 2e-06
gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BE... 52 7e-06
>gnl|LJGI|TC71238 weakly similar to UniRef100_Q45GJ7 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 565
Score = 910 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Plus
Query: 1 atggcagctttttcataccagtgtcaccctttccttgttgacccatcattcttgctcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atggcagctttttcataccagtgtcaccctttccttgttgacccatcattcttgctcaac 166
Query: 61 ataaacactggttctcctcctcttcctactcaatttccccttcatcaagaagcttctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ataaacactggttctcctcctcttcctactcaatttccccttcatcaagaagcttctctg 226
Query: 121 aatgttacaaatcaggacacaagctgtgctgatcagagctccaaaatcaccatcagtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aatgttacaaatcaggacacaagctgtgctgatcagagctccaaaatcaccatcagtgac 286
Query: 181 aatgagccttctataacaaaaaaccttagtcctcagtcttccatggtggtagacaagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aatgagccttctataacaaaaaaccttagtcctcagtcttccatggtggtagacaagctt 346
Query: 241 gaaattggtgaacaggtcactcagaaggtgacccctaagagaagaagcagaaaagattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaaattggtgaacaggtcactcagaaggtgacccctaagagaagaagcagaaaagattct 406
Query: 301 tcattgaatgaaccccaatctaaggatgatgcaaccgaagggagaagcaagaaacagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tcattgaatgaaccccaatctaaggatgatgcaaccgaagggagaagcaagaaacagaag 466
Query: 361 aagagcaatggtggggtgaaagatcaggacaaggcaagaactgagaagaaagaacagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagagcaatggtggggtgaaagatcaggacaaggcaagaactgagaagaaagaacagaga 526
Query: 421 aaatgtccggaagagcccccaacaggctatatccatgtc 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaatgtccggaagagcccccaacaggctatatccatgtc 565
>gnl|LJGI|TC69651 homologue to UniRef100_A8TLW5 Cluster: BHLH transcription factor
Upa20; n=1; Capsicum annuum|Rep: BHLH transcription
factor Upa20 - Capsicum annuum (Bell pepper), partial
(5%)
Length = 1071
Score = 644 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Plus
Query: 1 atggcagctttttcataccagtgtcaccctttccttgttgacccatcattcttgctcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atggcagctttttcataccagtgtcaccctttccttgttgacccatcattcttgctcaac 493
Query: 61 ataaacactggttctcctcctcttcctactcaatttccccttcatcaagaagcttctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ataaacactggttctcctcctcttcctactcaatttccccttcatcaagaagcttctctg 553
Query: 121 aatgttacaaatcaggacacaagctgtgctgatcagagctccaaaatcaccatcagtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aatgttacaaatcaggacacaagctgtgctgatcagagctccaaaatcaccatcagtgac 613
Query: 181 aatgagccttctataacaaaaaaccttagtcctcagtcttccatggtggtagacaagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatgagccttctataacaaaaaaccttagtcctcagtcttccatggtggtagacaagctt 673
Query: 241 gaaattggtgaacaggtcactcagaaggtgacccctaagagaagaagcagaaaagattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gaaattggtgaacaggtcactcagaaggtgacccctaagagaagaagcagaaaagattct 733
Query: 301 tcattgaatgaaccccaatctaagg 325
|||||||||||||||||||||||||
Sbjct: 734 tcattgaatgaaccccaatctaagg 758
Score = 315 bits (159), Expect = 3e-85
Identities = 162/163 (99%)
Strand = Plus / Plus
Query: 323 aggatgatgcaaccgaagggagaagcaagaaacagaagaagagcaatggtggggtgaaag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 aggatgatgcaaccgaagggagaagcaagaaacagaagaagagcaatggtggggtgaaag 968
Query: 383 atcaggacaaggcaagaactgagaagaaagaacagagaaaatgtccggaagagcccccaa 442
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 969 atcaggacaaggcaagaactgagaggaaagaacagagaaaatgtccggaagagcccccaa 1028
Query: 443 caggctatatccatgtcagagcaagaaggggtcaggccacgga 485
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 caggctatatccatgtcagagcaagaaggggtcaggccacgga 1071
>gnl|LJGI|AV424133 similar to UniRef100_A8TLW5 Cluster: BHLH transcription factor
Upa20; n=1; Capsicum annuum|Rep: BHLH transcription
factor Upa20 - Capsicum annuum (Bell pepper), partial
(19%)
Length = 307
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 529 gaaaggatgaaaaggttgcagagacttgtgccaggctgtgataaggtgactggaaaggcc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaaaggatgaaaaggttgcagagacttgtgccaggctgtgataaggtgactggaaaggcc 62
Query: 589 cttatgttggatgaaataatcaattatgttcagtcattacagaatcaagtggagttcttg 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cttatgttggatgaaataatcaattatgttcagtcattacagaatcaagtggagttcttg 122
Query: 649 tcaatgaagcttgcttctgtgaatcccatgttctatgatatggcaactgacctagacacc 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaatgaagcttgcttctgtgaatcccatgttctatgatatggcaactgacctagacacc 182
Query: 709 ctcttggttagaccagagaaattaaatagcttagcatcaccatcacctctttcatcagtg 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctcttggttagaccagagaaattaaatagcttagcatcaccatcacctctttcatcagtg 242
Query: 769 tcacattcacattgcaacagtcccaaccaagccacaacaacttttgctgaaacaaccaat 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcacattcacattgcaacagtcccaaccaagccacaacaacttttgctgaaacaaccaat 302
Query: 829 tccat 833
|||||
Sbjct: 303 tccat 307
>gnl|LJGI|TC61631
Length = 748
Score = 248 bits (125), Expect = 6e-65
Identities = 128/129 (99%)
Strand = Plus / Plus
Query: 883 cttcaagggcagagatcaaatttaccatctgaggaaacgggttgtcaattctgggacaca 942
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6 cttcaagggcagagatcaaatttaccatctgaggaaacgggttgtcaattttgggacaca 65
Query: 943 gaagatcagagacaaaagtttcttcttcatccatatggattcagcaacaatttaagttcc 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gaagatcagagacaaaagtttcttcttcatccatatggattcagcaacaatttaagttcc 125
Query: 1003 tttcattaa 1011
|||||||||
Sbjct: 126 tttcattaa 134
>gnl|LJGI|TC78089 similar to UniRef100_A7Q723 Cluster: Chromosome chr5 scaffold_58,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_58, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1046
Score = 81.8 bits (41), Expect = 8e-15
Identities = 157/193 (81%), Gaps = 2/193 (1%)
Strand = Plus / Plus
Query: 454 catgtcagagcaagaaggggtcaggccacggatagccacagccttgctgaaagggtaaga 513
||||| ||||||||||| ||||| || || |||||||| || ||||| ||||| || ||
Sbjct: 63 catgtgagagcaagaagaggtcaagctactgatagccatagtcttgcggaaagagttcga 122
Query: 514 agggagaaaataagtgaaaggatgaaaaggttgcagaga-cttgtgccaggctgtgataa 572
||||||||||| |||||||||||||| | | || ||| ||||| ||||| || ||||
Sbjct: 123 agggagaaaatcagtgaaaggatgaagctgctcca-agatcttgttccaggttgcaataa 181
Query: 573 ggtgactggaaaggcccttatgttggatgaaataatcaattatgttcagtcattacagaa 632
||| |||||||| || |||||| | |||||||| || || ||||| |||||||| |||
Sbjct: 182 ggtcactggaaaagcacttatgcttgatgaaattataaactatgtccagtcattgcagcg 241
Query: 633 tcaagtggagttc 645
|||||| ||||||
Sbjct: 242 tcaagttgagttc 254
>gnl|LJGI|TC81665 similar to UniRef100_A7Q2M2 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 581
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 598 gatgaaataatcaattatgttcagtcattacagaatcaagtggagttcttgtcaatgaag 657
||||| |||||||||||| |||| ||| | ||| ||||| ||||||||||||||||||
Sbjct: 14 gatgagataatcaattatattcaatcacttcagcgccaagttgagttcttgtcaatgaag 73
Query: 658 cttg 661
||||
Sbjct: 74 cttg 77
>gnl|LJGI|TC60285 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor;
n=1; Gossypium hirsutum|Rep: BHLH transcription factor -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (58%)
Length = 828
Score = 54.0 bits (27), Expect = 2e-06
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 447 ctatatccatgtcagagcaagaaggggtcaggccacggatagccacagccttgctgaaag 506
|||||| ||||| |||||||||||||| || || || |||||||||||| | || || ||
Sbjct: 458 ctatattcatgttagagcaagaagggggcaagctactgatagccacagcatagcagagag 517
Query: 507 ggtaagaagggagaaaataagtgaaaggatgaaaa 541
| |||||||| || || ||||| ||||||||||
Sbjct: 518 agctagaagggaaaagatcagtgagaggatgaaaa 552
>gnl|LJGI|TC71872 similar to UniRef100_Q8GWK7 Cluster: Protein BEE 3; n=1;
Arabidopsis thaliana|Rep: Protein BEE 3 - Arabidopsis
thaliana (Mouse-ear cress), partial (41%)
Length = 1161
Score = 52.0 bits (26), Expect = 7e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 592 atgttggatgaaataatcaattatgttcagtcattacagaatcaagtggagttc 645
|||||||||||||| || || ||||| ||||| || ||| ||||||||||||||
Sbjct: 644 atgttggatgaaatcataaactatgtgcagtctttgcagcatcaagtggagttc 697