Miyakogusa Predicted Gene
- Lj4g3v0133580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0133580.1 Non Chatacterized Hit- tr|I1KNH2|I1KNH2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25608
PE,70.49,0,HOMEOBOX PROTEIN KNOTTED-1-RELATED,NULL; HOMEOBOX PROTEIN
TRANSCRIPTION FACTORS,NULL; Homeodomain,Ho,CUFF.46499.1
(1062 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP036080 similar to UniRef100_A3QNN5 Cluster: Homeodoma... 498 e-140
gnl|LJGI|NP7225981 GB|AY790246.1|AAX21345.1 homeobox knotted-1-l... 184 8e-46
gnl|LJGI|TC76769 homeobox knotted-1-like protein KNOX2;homeobox ... 107 1e-22
gnl|LJGI|TC72803 UniRef100_A5Y4H1 Cluster: Class I KNOX homeobox... 78 1e-13
gnl|LJGI|TC70761 UniRef100_Q4VPF0 Cluster: Homeobox knotted-1-li... 72 8e-12
gnl|LJGI|TC66466 similar to UniRef100_Q9SXV1 Cluster: KN1-type h... 64 2e-09
>gnl|LJGI|BP036080 similar to UniRef100_A3QNN5 Cluster: Homeodomain protein Kn1; n=1;
Prunus dulcis|Rep: Homeodomain protein Kn1 - Prunus
dulcis (Almond) (Prunus amygdalus), partial (21%)
Length = 395
Score = 498 bits (251), Expect = e-140
Identities = 251/251 (100%)
Strand = Plus / Minus
Query: 812 ttgaatggtggagcagacattacaaatggccttacccatcggaatcacagaagcttgcgc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttgaatggtggagcagacattacaaatggccttacccatcggaatcacagaagcttgcgc 336
Query: 872 ttgcagaggcaacaggtctggatcagaagcaaattaacaactggtttatcaatcagagga 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttgcagaggcaacaggtctggatcagaagcaaattaacaactggtttatcaatcagagga 276
Query: 932 aacggcactggaaaccttctgatgacatgcaatttatggtgatggaaccaagccacccac 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aacggcactggaaaccttctgatgacatgcaatttatggtgatggaaccaagccacccac 216
Query: 992 accagtacatgaacagtactgttctgggcaatcactttcccatggatctctcccacacaa 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 accagtacatgaacagtactgttctgggcaatcactttcccatggatctctcccacacaa 156
Query: 1052 tgctctgaaaa 1062
|||||||||||
Sbjct: 155 tgctctgaaaa 145
>gnl|LJGI|NP7225981 GB|AY790246.1|AAX21345.1 homeobox knotted-1-like protein
KNOX1;homeobox transcription factor; LjKN1
Length = 543
Score = 184 bits (93), Expect = 8e-46
Identities = 410/516 (79%), Gaps = 9/516 (1%)
Strand = Plus / Plus
Query: 340 gcagcctacgtcaattgtcaaaagattggggctccgcctgaagtagtggcaaggttagaa 399
|||||||| |||| |||||||||| | || || || || ||||| ||||| ||||| |||
Sbjct: 13 gcagcctatgtcagttgtcaaaaggtgggagcaccaccagaagtggtggcgaggttggaa 72
Query: 400 gaagcatgtgcatctgcggcggcgatggccggtgtttcaggtgggacagcatgcatcggt 459
||||| || | ||||||| || ||||||||||| | | | |||| ||| | || |||
Sbjct: 73 gaagcgtgcggttctgcggtggggatggccggtgatgctgttgggtcaggtagtattggt 132
Query: 460 gaggatccgtcgttggatcagttcatggaggcttactgtgagatgctgataaagtaccag 519
|| ||||| | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 133 gaagatccagctctggatcagttcatggaggcttactgtgagatgctgaccaagtatgag 192
Query: 520 caagagctctctaaacccttcaaggaagccatgctcttccttcaaagaatcgagtgccag 579
||||||||||| ||||| || |||||||||||||||||||||||||| ||||||| |||
Sbjct: 193 caagagctctccaaaccattaaaggaagccatgctcttccttcaaaggatcgagtttcag 252
Query: 580 ctcaactctcttgccatttcttctgattttgcttgtgctgaagctaccgatagg---att 636
|||| ||| | ||||||||| ||| |||| ||| | || || ||| | |
Sbjct: 253 ttcaaaaatctcacagcttcttctgacgttggttgtaatgagggcactgaaaggaacact 312
Query: 637 ggatcatc---agagaatgttgatctacacaataacatgatagatccccaggtagaggac 693
|||||||| ||| ||| ||||||| || |||||||||||||| |||| |||||||
Sbjct: 313 ggatcatctgacgaggatgctgatctatac---aacatgatagatcctcaggcagaggac 369
Query: 694 caagaactgaaggttcaacttcttcacaagtacagtggatacctaggcaatttgaagcag 753
||| | |||| ||| ||| | | ||||| || |||||| | || | || |||||||
Sbjct: 370 agggaattaaagggtcagcttttgcgtaagtatagcggatacttgggaagttcgaagcag 429
Query: 754 gaattcatgaagaagagnnnnnnnggcaagctgcctaaagaagcaaggcaacaattactt 813
||||||||||||||||| || ||||| || |||||||||||||||||||| |||
Sbjct: 430 gaattcatgaagaagaggaagaaaggaaagctaccaaaagaagcaaggcaacaatttctt 489
Query: 814 gaatggtggagcagacattacaaatggccttaccca 849
||||||||||||||||||||||||||||||||||||
Sbjct: 490 gaatggtggagcagacattacaaatggccttaccca 525
>gnl|LJGI|TC76769 homeobox knotted-1-like protein KNOX2;homeobox transcription factor;
LjKN2
Length = 1740
Score = 107 bits (54), Expect = 1e-22
Identities = 126/150 (84%)
Strand = Plus / Plus
Query: 828 acattacaaatggccttacccatcggaatcacagaagcttgcgcttgcagaggcaacagg 887
||||||||||||||| || || ||||||||| ||||| | || | || ||| |||| ||
Sbjct: 1325 acattacaaatggccatatccttcggaatcagagaaggtggcattagctgagtcaactgg 1384
Query: 888 tctggatcagaagcaaattaacaactggtttatcaatcagaggaaacggcactggaaacc 947
| ||||||||||||| || ||||||||||| || ||||| ||||| |||| ||||||||
Sbjct: 1385 tttggatcagaagcagataaacaactggttcattaatcaaaggaagaggcattggaaacc 1444
Query: 948 ttctgatgacatgcaatttatggtgatgga 977
||||| |||||||| ||||||||||||||
Sbjct: 1445 atctgaagacatgcagtttatggtgatgga 1474
>gnl|LJGI|TC72803 UniRef100_A5Y4H1 Cluster: Class I KNOX homeobox transcription
factor; n=1; Medicago truncatula|Rep: Class I KNOX
homeobox transcription factor - Medicago truncatula
(Barrel medic), partial (22%)
Length = 484
Score = 77.8 bits (39), Expect = 1e-13
Identities = 102/123 (82%)
Strand = Plus / Plus
Query: 844 tacccatcggaatcacagaagcttgcgcttgcagaggcaacaggtctggatcagaagcaa 903
|||||||||||||| || |||| || |||||||| | || || |||||| ||||||
Sbjct: 1 tacccatcggaatctcaaaagcaagcacttgcagaatccactggattggatctgaagcag 60
Query: 904 attaacaactggtttatcaatcagaggaaacggcactggaaaccttctgatgacatgcaa 963
|| ||||||||||| ||||||||||| ||||| || ||||| |||||||| || ||||||
Sbjct: 61 ataaacaactggttcatcaatcagagaaaacgtcattggaagccttctgaggatatgcaa 120
Query: 964 ttt 966
|||
Sbjct: 121 ttt 123
>gnl|LJGI|TC70761 UniRef100_Q4VPF0 Cluster: Homeobox knotted-1-like protein KNOX3;
n=1; Lotus japonicus|Rep: Homeobox knotted-1-like
protein KNOX3 - Lotus japonicus, complete
Length = 1250
Score = 71.9 bits (36), Expect = 8e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 895 cagaagcaaattaacaactggtttatcaatcagaggaaacggcactggaaaccttctgat 954
||||||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||
Sbjct: 852 cagaagcaaattaacaattggtttattaatcagagaaaacgacattggaaaccatctgag 911
Query: 955 gacatgca 962
|||||||
Sbjct: 912 aacatgca 919
>gnl|LJGI|TC66466 similar to UniRef100_Q9SXV1 Cluster: KN1-type homeobox protein; n=1;
Nicotiana tabacum|Rep: KN1-type homeobox protein -
Nicotiana tabacum (Common tobacco), partial (64%)
Length = 1430
Score = 63.9 bits (32), Expect = 2e-09
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 898 aagcaaattaacaactggtttatcaatcagaggaaacggcactggaaaccttctga 953
||||| || ||||| ||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 1098 aagcagatcaacaattggttcatcaatcagaggaaacggcattggaaaccatctga 1153