Miyakogusa Predicted Gene
- Lj4g3v0133570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0133570.1 Non Chatacterized Hit- tr|D7L0V3|D7L0V3_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,42,0.000000003,seg,NULL; PHOSPHATASE-RELATED,NULL; UBX DOMAIN
CONTAINING PROTEIN,NULL; UBX,UBX; SEP,SEP domain; NSF,CUFF.46498.1
(924 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65956 similar to UniRef100_A7PX79 Cluster: Chromosome... 1790 0.0
gnl|LJGI|TC72639 similar to UniRef100_A7PX79 Cluster: Chromosome... 684 0.0
gnl|LJGI|TC79009 similar to UniRef100_A7PX79 Cluster: Chromosome... 666 0.0
gnl|LJGI|TC57331 similar to UniRef100_A7PX79 Cluster: Chromosome... 615 e-175
gnl|LJGI|AV771678 weakly similar to UniRef100_Q9LVE1 Cluster: Em... 214 7e-55
>gnl|LJGI|TC65956 similar to UniRef100_A7PX79 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1293
Score = 1790 bits (903), Expect = 0.0
Identities = 917/924 (99%)
Strand = Plus / Plus
Query: 1 atggcgtcgaaggagaagaaacctgcgtcatcgaaaccctccaccagtcgagctgacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcgtcgaaggagaagaaacctgcgtcatcgaaaccctccaccagtcgagctgacagg 137
Query: 61 atccgcactctctccgatctcaaccgcccatccgctgactctgacaccgactccgatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atccgcactctctccgatctcaaccgcccatccgctgactctgacaccgactccgatgac 197
Query: 121 cctcaggagtattacaccggcggcgaaaagagtggaatgcttgtccaggatccttcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 cctcaggagtattacaccggcggcgaaaagagtggaatgcttgtccaggatccttcaaaa 257
Query: 181 ggcactgatgtcgatgcaattttcaatcaagcaagacagctgggagctatagaaaggcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggcactgatgtcgatgcaattttcaatcaagcaagacagctgggagctatagaaaggcca 317
Query: 241 attgatcaacttcaggagccaccaaggtcgaccagttttactggaactggcaggttactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 attgatcaacttcaggagccaccaaggtcgaccagttttactggaactggcaggttactc 377
Query: 301 tcgggtgaaagcatacaatctgcccctcagcaacctgagtctgttgttcataacattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcgggtgaaagcatacaatctgcccctcagcaacctgagtctgttgttcataacattgtt 437
Query: 361 ttttggactaatggtttcactgtaaatgatggacctttgaggagcttggatgatcctgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttttggactaatggtttcactgtaaatgatggacctttgaggagcttggatgatcctgaa 497
Query: 421 aatgcctcatttttagagagcatnnnnnnntccgagtgtccaaaagagcttgaacctgca 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 498 aatgcctcatttttagagagcataaaaaaatccgagtgtccaaaagagcttgaacctgca 557
Query: 481 gataggaggtcatctgttaatgttaacctcataaggaggaatgagaagtatcatgaaccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gataggaggtcatctgttaatgttaacctcataaggaggaatgagaagtatcatgaaccc 617
Query: 541 gaaaagccccatgttccatttcagggtgtgggaagaactctaggaagcagctctgcttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaaaagccccatgttccatttcagggtgtgggaagaactctaggaagcagctctgcttca 677
Query: 601 gtggcacctcagccaactgcctcctcaacctcaacttctttcaacacttctccaacccct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtggcacctcagccaactgcctcctcaacctcaacttctttcaacacttctccaacccct 737
Query: 661 tctgctggcctggtggtagaccagtcattgccatcaacccaaatacagcttaggttagct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tctgctggcctggtggtagaccagtcattgccatcaacccaaatacagcttaggttagct 797
Query: 721 gatggaacccgcttgatatcaaattttaattatcaccatacagtcagcgacattcgtgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gatggaacccgcttgatatcaaattttaattatcaccatacagtcagcgacattcgtgcc 857
Query: 781 ttcattgatgcttctagacctgagggtgcaaggaattatcaacttcagataatgggtttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ttcattgatgcttctagacctgagggtgcaaggaattatcaacttcagataatgggtttt 917
Query: 841 cccccaaagcttctctcagatgaaactcagaccatcgagcaggcggggctagcaaattca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 cccccaaagcttctctcagatgaaactcagaccatcgagcaggcggggctagcaaattca 977
Query: 901 gttgtcatccagaaattctaaaaa 924
||||||||||||||||||||||||
Sbjct: 978 gttgtcatccagaaattctaaaaa 1001
>gnl|LJGI|TC72639 similar to UniRef100_A7PX79 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 674
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 580 ctaggaagcagctctgcttcagtggcacctcagccaactgcctcctcaacctcaacttct 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctaggaagcagctctgcttcagtggcacctcagccaactgcctcctcaacctcaacttct 61
Query: 640 ttcaacacttctccaaccccttctgctggcctggtggtagaccagtcattgccatcaacc 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcaacacttctccaaccccttctgctggcctggtggtagaccagtcattgccatcaacc 121
Query: 700 caaatacagcttaggttagctgatggaacccgcttgatatcaaattttaattatcaccat 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caaatacagcttaggttagctgatggaacccgcttgatatcaaattttaattatcaccat 181
Query: 760 acagtcagcgacattcgtgccttcattgatgcttctagacctgagggtgcaaggaattat 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acagtcagcgacattcgtgccttcattgatgcttctagacctgagggtgcaaggaattat 241
Query: 820 caacttcagataatgggttttcccccaaagcttctctcagatgaaactcagaccatcgag 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caacttcagataatgggttttcccccaaagcttctctcagatgaaactcagaccatcgag 301
Query: 880 caggcggggctagcaaattcagttgtcatccagaaattctaaaaa 924
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caggcggggctagcaaattcagttgtcatccagaaattctaaaaa 346
>gnl|LJGI|TC79009 similar to UniRef100_A7PX79 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1299
Score = 666 bits (336), Expect = 0.0
Identities = 744/881 (84%), Gaps = 6/881 (0%)
Strand = Plus / Plus
Query: 37 ccctccaccagtcgagctgacaggatccgcactctctccgatctcaaccgcccatccgct 96
||||| ||||||||||| | | | |||||||| |||||||| ||||||||||| |||||
Sbjct: 103 ccctcgaccagtcgagcaggcggaatccgcacgctctccgacctcaaccgcccctccgcc 162
Query: 97 gactctgacaccgactccgatgaccctcaggagtattacaccggcggcgaaaagagtgga 156
|| || |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 163 gattccgacagcgactccgatggccctcaggagtattacaccggcggcgagaagagtgga 222
Query: 157 atgcttgtccaggatccttcaaaaggcactgatgtcgatgcaattttcaatcaagcaaga 216
|||||||||||||| ||| | ||||| | ||||||||||||||||||||||||||| ||
Sbjct: 223 atgcttgtccaggaccctactaaaggaaatgatgtcgatgcaattttcaatcaagctagg 282
Query: 217 cagctgggagctatagaaaggccaattgatcaacttcaggagccaccaaggtcgaccagt 276
|| || |||||| ||||||||| ||||||| |||||||| || |||||||| || ||
Sbjct: 283 caactcggagctgtagaaaggcaccttgatcagcttcaggaacctccaaggtcaactagc 342
Query: 277 tttactggaactggcaggttactctcgggtgaaagcatacaatctgcccctcagcaacct 336
|||||||||||||||||| ||||||| || |||| | ||||| | | |||||||||
Sbjct: 343 tttactggaactggcagggtactctcaggggaaactgtgcaatcaacttcgcagcaacct 402
Query: 337 gagtctgttgttcataacattgttttttggactaatggtttcactgtaaatgatggacct 396
||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 403 gagtctgttgttcataacattgttttttggagtaacggtttcaccgtaaatgatggacct 462
Query: 397 ttgaggagcttggatgatcctgaaaatgcctcatttttagagagcatnnnnnnntccgag 456
|||||||| ||||| ||||||||||| |||||||||||||||||||| || ||
Sbjct: 463 ttgaggagattggacgatcctgaaaacgcctcatttttagagagcataaaaaaatctgaa 522
Query: 457 tgtccaaaagagcttgaacctgcagataggaggtcatctgttaatgttaacctcataagg 516
|| || |||||||||||||||||||||||||| ||||||| |||||||| ||||||||
Sbjct: 523 tgccccaaagagcttgaacctgcagataggagaacatctgtaaatgttaatctcataaga 582
Query: 517 aggaatgagaagtatcatgaacccgaaaagccccatgttccatttcagggtgtgggaaga 576
||||| ||||| |||| ||||||| ||||| ||||||||| ||| |||| |||||||||
Sbjct: 583 aggaacgagaactatcctgaacccaaaaagagccatgttccgtttaagggagtgggaaga 642
Query: 577 actctaggaagcagctctgcttcagtggcacctcagccaactgcctcctcaacctcaact 636
|||||||||||||||||||||||| ||||||| ||||||||| ||||| | ||
Sbjct: 643 actctaggaagcagctctgcttcaacggcacctgagccaactgttgcctcagc----ac- 697
Query: 637 tctttcaacacttctccaaccccttctgctggcctggtggtagaccagtcattgccatca 696
||| |||| | |||| |||||||| ||||| ||| ||| || |||||||||||||||
Sbjct: 698 -cttccaactcagctccttccccttcttctggcttggcggttgatcagtcattgccatca 756
Query: 697 acccaaatacagcttaggttagctgatggaacccgcttgatatcaaattttaattatcac 756
||| |||||| || ||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 757 acctcaatacaactcaggttagctgatggaacgcgcttggtatcgcattttaattatcac 816
Query: 757 catacagtcagcgacattcgtgccttcattgatgcttctagacctgagggtgcaaggaat 816
|| || |||||||||| || |||||||||||||| || ||||||| |||| ||||
Sbjct: 817 cacacgatcagcgacatccgagccttcattgatgcatccagacctgggggtcagcagaat 876
Query: 817 tatcaacttcagataatgggttttcccccaaagcttctctcagatgaaactcagaccatc 876
|||||||||||||| ||||| || ||||||||| |||| | ||||||| |||||| ||
Sbjct: 877 tatcaacttcagatgatgggcttccccccaaaggttctaactgatgaaaatcagactata 936
Query: 877 gagcaggcggggctagcaaattcagttgtcatccagaaatt 917
|| || || || || ||||||||||||||||| ||||||||
Sbjct: 937 gaacaagcaggactggcaaattcagttgtcatgcagaaatt 977
>gnl|LJGI|TC57331 similar to UniRef100_A7PX79 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 832
Score = 615 bits (310), Expect = e-175
Identities = 655/771 (84%), Gaps = 6/771 (0%)
Strand = Plus / Plus
Query: 37 ccctccaccagtcgagctgacaggatccgcactctctccgatctcaaccgcccatccgct 96
||||| ||||||||||| | | | |||||||| |||||||| ||||||||||| |||||
Sbjct: 64 ccctcgaccagtcgagcaggcggaatccgcacgctctccgacctcaaccgcccctccgcc 123
Query: 97 gactctgacaccgactccgatgaccctcaggagtattacaccggcggcgaaaagagtgga 156
|| || |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 124 gattccgacagcgactccgatggccctcaggagtattacaccggcggcgagaagagtgga 183
Query: 157 atgcttgtccaggatccttcaaaaggcactgatgtcgatgcaattttcaatcaagcaaga 216
|||||||||||||| ||| | ||||| | ||||||||||||||||||||||||||| ||
Sbjct: 184 atgcttgtccaggaccctactaaaggaaatgatgtcgatgcaattttcaatcaagctagg 243
Query: 217 cagctgggagctatagaaaggccaattgatcaacttcaggagccaccaaggtcgaccagt 276
|| || |||||| ||||||||| ||||||| |||||||| || |||||||| || ||
Sbjct: 244 caactcggagctgtagaaaggcaccttgatcagcttcaggaacctccaaggtcaactagc 303
Query: 277 tttactggaactggcaggttactctcgggtgaaagcatacaatctgcccctcagcaacct 336
|||||||||||||||||| ||||||| || |||| | ||||| | | |||||||||
Sbjct: 304 tttactggaactggcagggtactctcaggggaaactgtgcaatcaacttcgcagcaacct 363
Query: 337 gagtctgttgttcataacattgttttttggactaatggtttcactgtaaatgatggacct 396
||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 364 gagtctgttgttcataacattgttttttggagtaacggtttcaccgtaaatgatggacct 423
Query: 397 ttgaggagcttggatgatcctgaaaatgcctcatttttagagagcatnnnnnnntccgag 456
|||||||| ||||| ||||||||||| |||||||||||||||||||| || ||
Sbjct: 424 ttgaggagattggacgatcctgaaaacgcctcatttttagagagcataaaaaaatctgaa 483
Query: 457 tgtccaaaagagcttgaacctgcagataggaggtcatctgttaatgttaacctcataagg 516
|| || |||||||||||||||||||||||||| ||||||| |||||||| ||||||||
Sbjct: 484 tgccccaaagagcttgaacctgcagataggagaacatctgtaaatgttaatctcataaga 543
Query: 517 aggaatgagaagtatcatgaacccgaaaagccccatgttccatttcagggtgtgggaaga 576
||||| ||||| |||| ||||||| ||||| ||||||||| ||| |||| |||||||||
Sbjct: 544 aggaacgagaactatcctgaacccaaaaagagccatgttccgtttaagggagtgggaaga 603
Query: 577 actctaggaagcagctctgcttcagtggcacctcagccaactgcctcctcaacctcaact 636
|||||||||||||||||||||||| ||||||| ||||||||| ||||| | ||
Sbjct: 604 actctaggaagcagctctgcttcaacggcacctgagccaactgttgcctcagc----ac- 658
Query: 637 tctttcaacacttctccaaccccttctgctggcctggtggtagaccagtcattgccatca 696
||| |||| | |||| |||||||| ||||| ||| ||| || |||||||||||||||
Sbjct: 659 -cttccaactcagctccttccccttcttctggcttggcggttgatcagtcattgccatca 717
Query: 697 acccaaatacagcttaggttagctgatggaacccgcttgatatcaaattttaattatcac 756
||| |||||| || ||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 718 acctcaatacaactcaggttagctgatggaacgcgcttggtatcgcattttaattatcac 777
Query: 757 catacagtcagcgacattcgtgccttcattgatgcttctagacctgagggt 807
|| || |||||||||| || |||||||||||||| || ||||||| ||||
Sbjct: 778 cacacgatcagcgacatccgagccttcattgatgcatccagacctgggggt 828
>gnl|LJGI|AV771678 weakly similar to UniRef100_Q9LVE1 Cluster: Emb|CAB10320.1; n=1;
Arabidopsis thaliana|Rep: Emb|CAB10320.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (12%)
Length = 372
Score = 214 bits (108), Expect = 7e-55
Identities = 163/179 (91%), Gaps = 3/179 (1%)
Strand = Plus / Minus
Query: 749 attatcaccatacagtcagcgacattcgtgccttcattgatgcttctagacctgagggtg 808
||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 372 attatcaccatcccgtcagcgacattcgtgccttcactgatgcttgtagacctgagggtg 313
Query: 809 caaggaattatcaacttcagataatgggttttcccccaaagc--ttctctcagatgaaac 866
||||||||||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct: 312 caaggaattatcaacttcagataatgggttttccccccacgcctctctctcagatgaaac 253
Query: 867 tcagaccatcga-gcaggcggggctagcaaattcagttgtcatccagaaattctaaaaa 924
| |||||||||| | |||| ||||||| |||||||||||||||| |||||||||||||
Sbjct: 252 ttagaccatcgacccgggcgcggctagccaattcagttgtcatcccgaaattctaaaaa 194