Miyakogusa Predicted Gene

Lj4g3v0119930.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0119930.1 Non Chatacterized Hit- tr|I1L010|I1L010_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,80.71,0,PUTATIVE UNCHARACTERIZED PROTEIN,NULL; FAMILY NOT
NAMED,NULL; no description,NULL; SUGRTRNSPORT,Suga,CUFF.46452.1
         (1746 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV418772 weakly similar to UniRef100_A7R1W8 Cluster: Ch...   428   e-119
gnl|LJGI|AV767239                                                     133   4e-30
gnl|LJGI|FS352977 similar to UniRef100_A7Q167 Cluster: Chromosom...    62   1e-08

>gnl|LJGI|AV418772 weakly similar to UniRef100_A7R1W8 Cluster: Chromosome undetermined
            scaffold_383, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_383, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (3%)
          Length = 218

 Score =  428 bits (216), Expect = e-119
 Identities = 216/216 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1093 gtggcagctcaccattctcctgcagttaataaccaagacaccctcatttttggtgggaac 1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3    gtggcagctcaccattctcctgcagttaataaccaagacaccctcatttttggtgggaac 62

                                                                        
Query: 1153 tctacatgccaggcttacacaaaggccccaaatttctcttcgtggagctgtatgcagtgt 1212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63   tctacatgccaggcttacacaaaggccccaaatttctcttcgtggagctgtatgcagtgt 122

                                                                        
Query: 1213 ttgcaagcagattgtgccttctgtgccaacggcaagagtgaatttcttccgggagcatgc 1272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123  ttgcaagcagattgtgccttctgtgccaacggcaagagtgaatttcttccgggagcatgc 182

                                                
Query: 1273 ttggctgcagacaagagtgtaagaggtgtgtgccgc 1308
            ||||||||||||||||||||||||||||||||||||
Sbjct: 183  ttggctgcagacaagagtgtaagaggtgtgtgccgc 218


>gnl|LJGI|AV767239 
          Length = 347

 Score =  133 bits (67), Expect = 4e-30
 Identities = 97/107 (90%)
 Strand = Plus / Minus

                                                                        
Query: 1638 tcagtttgaggaggtagagaagatgctccaaaaaggtttcagacctgccccatttaacaa 1697
            ||||||| || ||||||| || |||||||||| |||||||||||||||||||||||||||
Sbjct: 347  tcagtttaagaaggtagaaaaaatgctccaaataggtttcagacctgccccatttaacaa 288

                                                           
Query: 1698 gaaacaggggggtaacaagaagatagaaaatgaaggctatccttagt 1744
             ||||||||||||  |||||| ||||||||| |||||||||||||||
Sbjct: 287  aaaacaggggggtggcaagaaaatagaaaataaaggctatccttagt 241


>gnl|LJGI|FS352977 similar to UniRef100_A7Q167 Cluster: Chromosome chr10 scaffold_43,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr10 scaffold_43, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 687

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 1405 ggaatgggatctgtgccttgggttctgaactctgagatataccctttgagattcagagg 1463
            ||||||||| |||| || |||||| | |||||||||||||| |||||||||| ||||||
Sbjct: 605  ggaatgggaactgttccatgggttataaactctgagatatatcctttgagatacagagg 547