Miyakogusa Predicted Gene
- Lj4g3v0119780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0119780.2 Non Chatacterized Hit- tr|I3SPJ5|I3SPJ5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,82.03,0,seg,NULL; GRAS,Transcription factor GRAS; FAMILY NOT
NAMED,NULL,CUFF.46442.2
(1259 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77796 similar to UniRef100_A7R429 Cluster: Chromosome... 1742 0.0
gnl|LJGI|TC60993 similar to UniRef100_A7R429 Cluster: Chromosome... 591 e-168
gnl|LJGI|GO022296 similar to UniRef100_A7R429 Cluster: Chromosom... 442 e-123
gnl|LJGI|TC66476 similar to UniRef100_A7R429 Cluster: Chromosome... 143 3e-33
gnl|LJGI|TC78190 similar to UniRef100_A7R429 Cluster: Chromosome... 84 2e-15
gnl|LJGI|TC71525 similar to UniRef100_A7P0E9 Cluster: Chromosome... 60 4e-08
gnl|LJGI|TC78496 homologue to UniRef100_A7Q341 Cluster: Chromoso... 52 9e-06
gnl|LJGI|TC61508 similar to UniRef100_A7P114 Cluster: Chromosome... 52 9e-06
>gnl|LJGI|TC77796 similar to UniRef100_A7R429 Cluster: Chromosome undetermined
scaffold_610, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_610, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(55%)
Length = 1332
Score = 1742 bits (879), Expect = 0.0
Identities = 893/900 (99%)
Strand = Plus / Plus
Query: 360 ggatgaggatattccaacagcaagagggtggatagataatatattggggaagatggtatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgaggatattccaacagcaagagggtggatagataatatattggggaagatggtatc 60
Query: 420 agttgctggagatccatctcagagattaggtgcttacttgttggaggggcttcgagcaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttgctggagatccatctcagagattaggtgcttacttgttggaggggcttcgagcaag 120
Query: 480 gttggaattgtcagggagtctgatctacaaagccttgaaatgtgaacaacccacaggcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttggaattgtcagggagtctgatctacaaagccttgaaatgtgaacaacccacaggcaa 180
Query: 540 agaactaatgagttacatgcacatcctgtatcagatttgtccatattggaagtttgctta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaactaatgagttacatgcacatcctgtatcagatttgtccatattggaagtttgctta 240
Query: 600 catatctgcaaatgctgccattgcagaagcaatggcaaatgaatccaggattcatataat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catatctgcaaatgctgccattgcagaagcaatggcaaatgaatccaggattcatataat 300
Query: 660 tgatttccagattgcgcagggcacacagtggcatttacttatacaagctcttgcacacag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatttccagattgcgcagggcacacagtggcatttacttatacaagctcttgcacacag 360
Query: 720 gcctggtggacctcctttcattcggattactggtgttgatgattcccaatcttttcatgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcctggtggacctcctttcattcggattactggtgttgatgattcccaatcttttcatgc 420
Query: 780 tcnnnnnnnagggctcgagattgttggagaaaggctttcagatttcgccaggtcttacgg 839
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgggggggagggctcgagattgttggagaaaggctttcagatttcgccaggtcttacgg 480
Query: 840 ggtgccatttgagttccacagtgctgctatgtctggctgtgaggttgaacgtgaaaatct 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtgccatttgagttccacagtgctgctatgtctggctgtgaggttgaacgtgaaaatct 540
Query: 900 cggagttcgacccggggaagcactcgctgtgaactttccttatgttctgcaccacatgcc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggagttcgacccggggaagcactcgctgtgaactttccttatgttctgcaccacatgcc 600
Query: 960 agatgagagtgtgagcacggagaatcatagagacaggttgttgagattggttaagagctt 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agatgagagtgtgagcacggagaatcatagagacaggttgttgagattggttaagagctt 660
Query: 1020 gtctccaaaggttgttacccttgctgagcaagaatccaacaccaacacttcacctttctt 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtctccaaaggttgttacccttgctgagcaagaatccaacaccaacacttcacctttctt 720
Query: 1080 taacaggttcatggagacactggagtactacacagctatgtttgaatcaatagatgtggc 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taacaggttcatggagacactggagtactacacagctatgtttgaatcaatagatgtggc 780
Query: 1140 ttgccccagagatgataagaagcggatcagcgcagagcagcactgcgtggcacgggacat 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttgccccagagatgataagaagcggatcagcgcagagcagcactgcgtggcacgggacat 840
Query: 1200 tgtcaacatggtagcctgtgagggggctgagagggtggaaaggcatgagctttttgggaa 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgtcaacatggtagcctgtgagggggctgagagggtggaaaggcatgagctttttgggaa 900
>gnl|LJGI|TC60993 similar to UniRef100_A7R429 Cluster: Chromosome undetermined
scaffold_610, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_610,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 838
Score = 591 bits (298), Expect = e-168
Identities = 298/298 (100%)
Strand = Plus / Plus
Query: 1 atgaattgtgactccccttcatatggcagtgtatcctctaaccgtagtccattatctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgaattgtgactccccttcatatggcagtgtatcctctaaccgtagtccattatctcca 600
Query: 61 caagattctcagtcaagccattcagatcaccaccggtcacctgaaaatacctatggatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caagattctcagtcaagccattcagatcaccaccggtcacctgaaaatacctatggatca 660
Query: 121 ccaataagcagcttgtccagtgttgatgatgggaatgagttgaagcacaaacttagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccaataagcagcttgtccagtgttgatgatgggaatgagttgaagcacaaacttagagaa 720
Query: 181 ctggagatttcattgttgggacttgatgaatcagatattgttgacagttgtgacaactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctggagatttcattgttgggacttgatgaatcagatattgttgacagttgtgacaactgg 780
Query: 241 ggtagtagccttcgcggagcaccaccaccatcagccaaatatgattggaatctcattg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggtagtagccttcgcggagcaccaccaccatcagccaaatatgattggaatctcattg 838
>gnl|LJGI|GO022296 similar to UniRef100_A7R429 Cluster: Chromosome undetermined
scaffold_610, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_610,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (10%)
Length = 771
Score = 442 bits (223), Expect = e-123
Identities = 237/239 (99%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 1 atgaattgtgactccccttcatatggcagtgtatcctctaaccgtagtccattatctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atgaattgtgactccccttcatatggcagtgtatcctctaaccgtagtccattatctcca 594
Query: 61 caagattctcagtcaagccattcagatcaccaccggtcacctgaaaatacctatggatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 caagattctcagtcaagccattcagatcaccaccggtcacctgaaaatacctatggatca 654
Query: 121 ccaataagcagcttgtccagtgttgatgatgggaatgagttgaagcacaaacttagagaa 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 655 ccaataagcagcttgtccagtgttgatgatgggaatgagttgaagcac-aacttagagaa 713
Query: 181 ctggagatttcattgttgggacttgatgaatcagatattgttgacagttgtgacaactg 239
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 714 ctggagatttcattgttgggacttgatg-atcagatattgttgacagttgtgacaactg 771
>gnl|LJGI|TC66476 similar to UniRef100_A7R429 Cluster: Chromosome undetermined
scaffold_610, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_610, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 1141
Score = 143 bits (72), Expect = 3e-33
Identities = 284/354 (80%), Gaps = 3/354 (0%)
Strand = Plus / Plus
Query: 310 ccaaagcttgacttgaaacaagtcctcattctatgtgcacaagcagtgtcggatgaggat 369
|||||||| ||||||||| | |||||||||| ||| || || || ||||| |||| |||
Sbjct: 788 ccaaagctagacttgaaagatgtcctcattcgatgcgcgcaggccgtgtcagatggtgat 847
Query: 370 attccaacagcaagagggtggatagataatatattggggaagatggtatcagttgctgga 429
|| | |||||| || ||||| ||||| | || || || ||||| |||||||||||
Sbjct: 848 atgcaaacagctcttggctggatgaataatgtgttaggaaaaatggtgtcagttgctggg 907
Query: 430 gatccatctcagagattaggtgcttacttgttggaggggcttcgagcaaggttggaattg 489
|||||| |||||| |||| |||||| |||||||||| | |||| |||||||| |
Sbjct: 908 gatccaattcagaggctaggagcttacatgttggagggtttaagagccaggttggagtca 967
Query: 490 tcagggagtctgatctacaaagccttgaaatgtgaacaaccca---caggcaaagaacta 546
|||||||| | ||||||||||||||||| ||||||||||| | || ||||||| ||
Sbjct: 968 tcagggagcttaatctacaaagccttgaagtgtgaacaaccaattacaagcaaagagctt 1027
Query: 547 atgagttacatgcacatcctgtatcagatttgtccatattggaagtttgcttacatatct 606
|||||||||||| |||| ||||||| |||| ||||||||||| ||| |||||||||||
Sbjct: 1028 atgagttacatggacattttgtatcaagtttgcccatattggaaatttacttacatatct 1087
Query: 607 gcaaatgctgccattgcagaagcaatggcaaatgaatccaggattcatataatt 660
| |||| || |||| |||||||||| |||||||||||| ||||| ||||||
Sbjct: 1088 tccaatgttgttattggagaagcaatgcaaaatgaatccagaattcacataatt 1141
>gnl|LJGI|TC78190 similar to UniRef100_A7R429 Cluster: Chromosome undetermined
scaffold_610, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_610, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 813
Score = 83.8 bits (42), Expect = 2e-15
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 1165 atcagcgcagagcagcactgcgtggcacgggacattgtcaacatggtagcctgtgagggg 1224
||||| || |||||||||||||| || || ||||||||||||||| | || || ||||||
Sbjct: 13 atcagtgcggagcagcactgcgtagcgcgtgacattgtcaacatgattgcttgcgagggg 72
Query: 1225 gctgagagggtggaaaggcatgagctttttgg 1256
| |||||||||||||| |||||||| |||||
Sbjct: 73 ncggagagggtggaaagncatgagctctttgg 104
>gnl|LJGI|TC71525 similar to UniRef100_A7P0E9 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 906
Score = 60.0 bits (30), Expect = 4e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 995 ggttgttgagattggttaagagcttgtctccaaaggttgttacccttgctgagcaagaat 1054
||||||||||||||| ||| |||||||||| ||||| || || || | |||||||||||
Sbjct: 195 ggttgttgagattggcaaagtgcttgtctcctaaggtagtgacactggttgagcaagaat 254
Query: 1055 ccaacaccaa 1064
| ||||||||
Sbjct: 255 caaacaccaa 264
>gnl|LJGI|TC78496 homologue to UniRef100_A7Q341 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 604
Score = 52.0 bits (26), Expect = 9e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1103 agtactacacagctatgtttgaatcaatagatgt 1136
|||| |||||||| ||||||||||||||||||||
Sbjct: 1 agtattacacagcaatgtttgaatcaatagatgt 34
>gnl|LJGI|TC61508 similar to UniRef100_A7P114 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1566
Score = 52.0 bits (26), Expect = 9e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1045 gagcaagaatccaacaccaacacttcacctttctttaacaggttcatggagacactggag 1104
||||| ||||| || || ||||| || |||||||| ||||||||||||||||| ||||
Sbjct: 679 gagcaggaatcaaatacaaacacatcccctttcttcaacaggttcatggagaccttggat 738
Query: 1105 tactac 1110
||||||
Sbjct: 739 tactac 744