Miyakogusa Predicted Gene
- Lj4g3v0109540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0109540.1 Non Chatacterized Hit- tr|F7CZ16|F7CZ16_XENTR
Uncharacterized protein OS=Xenopus tropicalis
GN=ube2c,57.14,2e-19,Ubiquitin-conjugating enzyme E2, catalytic
d,NULL; UQ_con,Ubiquitin-conjugating enzyme, E2; no descr,CUFF.46436.1
(243 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC599671 similar to UniRef100_A5AE59 Cluster: Ubiquitin... 482 e-136
gnl|LJGI|GO019923 similar to UniRef100_A5AE59 Cluster: Ubiquitin... 436 e-122
gnl|LJGI|TC79121 similar to UniRef100_A5AE59 Cluster: Ubiquitin ... 262 9e-70
>gnl|LJGI|DC599671 similar to UniRef100_A5AE59 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), partial (37%)
Length = 575
Score = 482 bits (243), Expect = e-136
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 atgatgactggaggagtatcagcttttcctaagggtgagagtatttttacatggaatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atgatgactggaggagtatcagcttttcctaagggtgagagtatttttacatggaatggc 250
Query: 61 acaattgaaggcggaaaagggactctgtatgagggcttatcttatgaactctccttgcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acaattgaaggcggaaaagggactctgtatgagggcttatcttatgaactctccttgcgt 310
Query: 121 tttcccctggactatccttttaagccaccccaagtgaagtttgaaaaaatgtgctttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tttcccctggactatccttttaagccaccccaagtgaagtttgaaaaaatgtgctttcat 370
Query: 181 ccaaatatcgatcagtttggcaacatttgtctggacatccttcaggtttctgttatgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccaaatatcgatcagtttggcaacatttgtctggacatccttcaggtttctgttatgagt 430
Query: 241 tag 243
|||
Sbjct: 431 tag 433
>gnl|LJGI|GO019923 similar to UniRef100_A5AE59 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), partial (37%)
Length = 717
Score = 436 bits (220), Expect = e-122
Identities = 223/224 (99%)
Strand = Plus / Plus
Query: 1 atgatgactggaggagtatcagcttttcctaagggtgagagtatttttacatggaatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgatgactggaggagtatcagcttttcctaagggtgagagtatttttacatggaatggc 227
Query: 61 acaattgaaggcggaaaagggactctgtatgagggcttatcttatgaactctccttgcgt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 228 acaattgaaggcggaaaagggactctgtatgagggtttatcttatgaactctccttgcgt 287
Query: 121 tttcccctggactatccttttaagccaccccaagtgaagtttgaaaaaatgtgctttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttcccctggactatccttttaagccaccccaagtgaagtttgaaaaaatgtgctttcat 347
Query: 181 ccaaatatcgatcagtttggcaacatttgtctggacatccttca 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccaaatatcgatcagtttggcaacatttgtctggacatccttca 391
>gnl|LJGI|TC79121 similar to UniRef100_A5AE59 Cluster: Ubiquitin carrier protein;
n=1; Vitis vinifera|Rep: Ubiquitin carrier protein -
Vitis vinifera (Grape), partial (46%)
Length = 461
Score = 262 bits (132), Expect = 9e-70
Identities = 156/164 (95%)
Strand = Plus / Plus
Query: 13 ggagtatcagcttttcctaagggtgagagtatttttacatggaatggcacaattgaaggc 72
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 298 ggagtatcagcttttcctgagggtgagagtatttttacatggattggcacaattgaaggt 357
Query: 73 ggaaaagggactctgtatgagggcttatcttatgaactctccttgcgttttcccctggac 132
||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||
Sbjct: 358 ggaaaagggactctgtatgagggtttatcttataaactctccttgcgtttccccctggac 417
Query: 133 tatccttttaagccaccccaagtgaagtttgaaaaaatgtgctt 176
|||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 418 tatccttttaagccaccccaagtgaagtttgagacaatgtgctt 461