Miyakogusa Predicted Gene

Lj4g3v0109520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0109520.1 Non Chatacterized Hit- tr|I1MQY9|I1MQY9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.05,0,PROBABLE
CALCIUM-ACTIVATED OUTWARD-RECTIFYING POTASSIUM CHANNEL,NULL; POTASSIUM
CHANNEL, SUBFAMILY K,CUFF.46434.1
         (705 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63746 similar to UniRef100_Q9LLM5 Cluster: Outward-re...    62   5e-09
gnl|LJGI|FS334304 similar to UniRef100_Q9ZPL3 Cluster: Pulvinus ...    52   5e-06

>gnl|LJGI|TC63746 similar to UniRef100_Q9LLM5 Cluster: Outward-rectifying potassium
           channel KCO1; n=1; Eucalyptus camaldulensis|Rep:
           Outward-rectifying potassium channel KCO1 - Eucalyptus
           camaldulensis (River red gum), partial (36%)
          Length = 702

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 1   atgaccactgttggatatggagatcttgtgccgaatagc 39
           ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 460 atgaccactgttggatatggagaccttgtgcctaatagc 498


>gnl|LJGI|FS334304 similar to UniRef100_Q9ZPL3 Cluster: Pulvinus outward-rectifying
           channel for potassium SPOCK1; n=1; Samanea saman|Rep:
           Pulvinus outward-rectifying channel for potassium SPOCK1
           - Samanea saman (Rain tree), partial (45%)
          Length = 772

 Score = 52.0 bits (26), Expect = 5e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 1   atgaccactgttggatatggagatcttgtgccgaatag 38
           |||||||| |||||||||||||| |||||||| |||||
Sbjct: 481 atgaccacagttggatatggagaccttgtgcccaatag 518