Miyakogusa Predicted Gene

Lj4g3v0098330.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0098330.1 Non Chatacterized Hit- tr|H2LVS0|H2LVS0_ORYLA
Uncharacterized protein (Fragment) OS=Oryzias latipes ,51.61,0.3,
,CUFF.46419.1
         (267 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338862 similar to UniRef100_Q13BJ2 Cluster: Chaperone...   198   1e-50
gnl|LJGI|FS350483                                                     143   6e-34
gnl|LJGI|TC79520                                                      129   9e-30
gnl|LJGI|TC76763 similar to UniRef100_Q9EMA1 Cluster: Envelope g...   113   5e-25
gnl|LJGI|TC70244 weakly similar to UniRef100_Q9BQ87 Cluster: F-b...    70   7e-12

>gnl|LJGI|FS338862 similar to UniRef100_Q13BJ2 Cluster: Chaperone DnaJ-like; n=1;
           Rhodopseudomonas palustris BisB5|Rep: Chaperone
           DnaJ-like - Rhodopseudomonas palustris (strain BisB5),
           partial (6%)
          Length = 226

 Score =  198 bits (100), Expect = 1e-50
 Identities = 100/100 (100%)
 Strand = Plus / Minus

                                                                       
Query: 168 gaagatgaagggaattatgggtgcctgggttttgaagatgaagaaaatggttaaatttct 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gaagatgaagggaattatgggtgcctgggttttgaagatgaagaaaatggttaaatttct 75

                                                   
Query: 228 aggttttggagatgaacttctggtatttcaatttcaatga 267
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  aggttttggagatgaacttctggtatttcaatttcaatga 35


>gnl|LJGI|FS350483 
          Length = 650

 Score =  143 bits (72), Expect = 6e-34
 Identities = 93/100 (93%)
 Strand = Plus / Minus

                                                                       
Query: 168 gaagatgaagggaattatgggtgcctgggttttgaagatgaagaaaatggttaaatttct 227
           |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 601 gaagatgaagagaattatgggtgtctgggtttttaagatgaagaaaatggttaaatttct 542

                                                   
Query: 228 aggttttggagatgaacttctggtatttcaatttcaatga 267
           ||||||| ||||||||||| |||| ||||||||| |||||
Sbjct: 541 aggtttttgagatgaacttgtggtgtttcaattttaatga 502


>gnl|LJGI|TC79520 
          Length = 695

 Score =  129 bits (65), Expect = 9e-30
 Identities = 94/101 (93%), Gaps = 2/101 (1%)
 Strand = Plus / Minus

                                                                       
Query: 168 gaagatgaagggaattatgggtgcctgggttttgaagatgaagaaaatggttaaatttct 227
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gaagatgaagggaattatgg-tgcctgggttttgaagatgaagaaaatggttaaatttct 113

                                                    
Query: 228 aggttttggagatgaac-ttctggtatttcaatttcaatga 267
           |||||| | |||||||| || |||| ||||||||| |||||
Sbjct: 112 aggtttagaagatgaacattttggtgtttcaattttaatga 72


>gnl|LJGI|TC76763 similar to UniRef100_Q9EMA1 Cluster: Envelope glycoprotein; n=1;
           Human immunodeficiency virus 1|Rep: Envelope
           glycoprotein - Human immunodeficiency virus 1, partial
           (12%)
          Length = 470

 Score =  113 bits (57), Expect = 5e-25
 Identities = 79/85 (92%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                       
Query: 168 gaagatgaagggaattatgggtgcctgggttttgaagatgaagaaaatggttaaatttct 227
           |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |
Sbjct: 230 gaagatgaagggaattatgg-tgcctgggttttgaagatgaagaaaagggttaaatttat 172

                                    
Query: 228 aggttttggagatgaacttctggta 252
           |||||| | |||||||||| |||||
Sbjct: 171 aggtttagaagatgaacttttggta 147


>gnl|LJGI|TC70244 weakly similar to UniRef100_Q9BQ87 Cluster: F-box-like/WD
           repeat-containing protein TBL1Y; n=2; Homo sapiens|Rep:
           F-box-like/WD repeat-containing protein TBL1Y - Homo
           sapiens (Human), partial (4%)
          Length = 701

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 67  atttcaacccaccccctcttctctctgataatggcgatcccacccaccgccgcca 121
           ||||||||||||||||||||||||||||  |||  ||||||||||||| ||||||
Sbjct: 262 atttcaacccaccccctcttctctctgaccatgcagatcccacccaccaccgcca 208