Miyakogusa Predicted Gene
- Lj4g3v0095240.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0095240.3 tr|G7ZZV4|G7ZZV4_MEDTR BTB/POZ domain-containing
protein OS=Medicago truncatula GN=MTR_091s0019 PE=4,82.79,0,NPH3,NPH3;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.46413.3
(1428 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75613 similar to UniRef100_A2Q315 Cluster: Root photo... 597 e-170
gnl|LJGI|AV777782 similar to UniRef100_A2Q315 Cluster: Root phot... 274 1e-72
gnl|LJGI|FS331219 weakly similar to UniRef100_A7P4B3 Cluster: Ch... 194 1e-48
>gnl|LJGI|TC75613 similar to UniRef100_A2Q315 Cluster: Root phototropism protein 3 ,
related; n=1; Medicago truncatula|Rep: Root phototropism
protein 3 , related - Medicago truncatula (Barrel medic),
partial (17%)
Length = 557
Score = 597 bits (301), Expect = e-170
Identities = 315/322 (97%)
Strand = Plus / Minus
Query: 1107 ggcaaatgccagtcaaaaactgccaaaaccacatgagatacttgcaggaataaaacatag 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggcaaatgccagtcaaaaactgccaaaaccacatgagatacttgcaggaataaaacatag 498
Query: 1167 accagccacaagggatgatggccagagcaagcaatctttaggccaagataaagagttcaa 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 accagccacaagggatgatggccagagcaagcaatctttaggccaagataaagagttcaa 438
Query: 1227 tggagaagtgacaagaactcaaagattagatagtaagttgccattggaactagnnnnnnn 1286
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tggagaagtgacaagaactcaaagattagatagtaagttgccattggaactagaaaaaaa 378
Query: 1287 gatggttatcagaggagacactgagagggagttagataaggtgaggagagccaaagatga 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gatggttatcagaggagacactgagagggagttagataaggtgaggagagccaaagatga 318
Query: 1347 aagtagttcaagctgcaaggtggaattggatcctaaaagaatcataagaagggcaagaag 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aagtagttcaagctgcaaggtggaattggatcctaaaagaatcataagaagggcaagaag 258
Query: 1407 taaatcagaacatagcatgaaa 1428
||||||||||||||||||||||
Sbjct: 257 taaatcagaacatagcatgaaa 236
>gnl|LJGI|AV777782 similar to UniRef100_A2Q315 Cluster: Root phototropism protein 3 ,
related; n=1; Medicago truncatula|Rep: Root phototropism
protein 3 , related - Medicago truncatula (Barrel medic),
partial (35%)
Length = 424
Score = 274 bits (138), Expect = 1e-72
Identities = 347/416 (83%), Gaps = 3/416 (0%)
Strand = Plus / Plus
Query: 622 tttgaggaggcaacagtgagtgacttgctttatccttcaaaaacatcttcttctgaacag 681
|||||||||||||||||||||||| ||||||||||||||| ||||| | | || |||
Sbjct: 10 tttgaggaggcaacagtgagtgacctgctttatccttcaa---catctccattggaccag 66
Query: 682 aactattatgatgttgagttagttcaagcagtgctggaaacattcttgaagctttggaaa 741
|| | |||||| |||||||||| ||||||| |||||| || ||||| ||||||||
Sbjct: 67 aatttctatgatacggagttagttctagcagtgttggaaagctttgtgaagttttggaaa 126
Query: 742 agaatgtccccaggtgctgtggacaacagctactttttaagatcagtcagaaatgtaggc 801
||||| ||||| ||||||||||| ||||| |||| || |||||| ||||||| || |||
Sbjct: 127 agaatctcccctggtgctgtggataacaggcacttcttgagatcaatcagaaaagttggc 186
Query: 802 aggctcattgattcctatcttcaagtggttgcaagagatgataacatgcaagtttcaaag 861
| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||
Sbjct: 187 aagctcattgattcctatcttcaagtggttgcaagggatgaaaacatgccagtgcagaag 246
Query: 862 tttgtctctcttgctgaaactgtgccgagtattgctcgagtagatcacgatgatctgtac 921
||||| |||||||||||||||| || ||||| ||| |||| || |||||| |||||
Sbjct: 247 tttgtagctcttgctgaaactgtaccagctattggccgaatagagcatgatgatttgtac 306
Query: 922 aaggcgatcgacatctatcttaaggtgcatcctgacatgagcaagacagacaagaagcgc 981
||| || ||||||||||||||||||||||||| |||||||| |||||||||| ||
Sbjct: 307 cgggcaattaacatctatcttaaggtgcatcctgatctgagcaaggtagacaagaagtgc 366
Query: 982 ttgtgtgggattctagactgccaaagactgtccccagaagtgcgttcccatgcagt 1037
||||| ||| |||||| |||||||||||||||||||||||| || | ||||||||
Sbjct: 367 ttgtgccggagtctagagtgccaaagactgtccccagaagtgtgtgctcatgcagt 422
>gnl|LJGI|FS331219 weakly similar to UniRef100_A7P4B3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 759
Score = 194 bits (98), Expect = 1e-48
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atgaacgactccattgagaggggaaacttggtaggaaaacttgaatcatttttcaattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atgaacgactccattgagaggggaaacttggtaggaaaacttgaatcatttttcaattca 721
Query: 61 tgcattcttgaaggttggaaggattccattgccacgct 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgcattcttgaaggttggaaggattccattgccacgct 759