Miyakogusa Predicted Gene
- Lj4g3v0073480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0073480.1 Non Chatacterized Hit- tr|A5B095|A5B095_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.45,1e-18,Vps53_N,Vps53-like,
N-terminal,gene.Ljchr4_pseudomol_20120830.path1.gene105.1
(408 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS323189 homologue to UniRef100_A7PVI9 Cluster: Chromos... 327 3e-89
gnl|LJGI|TC66342 homologue to UniRef100_A7PVI9 Cluster: Chromoso... 327 3e-89
>gnl|LJGI|FS323189 homologue to UniRef100_A7PVI9 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 752
Score = 327 bits (165), Expect = 3e-89
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1 atgttcccaaacgaagcatcgctatctggtgttgagccactcatgcagaaaatccagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgttcccaaacgaagcatcgctatctggtgttgagccactcatgcagaaaatccagaac 239
Query: 61 gagattcggactgttgatgctggaatcttatctgctgttcgccaacagagtaattcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gagattcggactgttgatgctggaatcttatctgctgttcgccaacagagtaattcagga 299
Query: 121 accaaggcgaaagaagatctcgctgccgctacgtgtgccgttgag 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 accaaggcgaaagaagatctcgctgccgctacgtgtgccgttgag 344
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 184 gtctctgctgttgaacagcttcaagtcatggcttcaaaacgccaatataaagaggcagct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtctctgctgttgaacagcttcaagtcatggcttcaaaacgccaatataaagaggcagct 554
Query: 244 gcacaattggagg 256
|||||||||||||
Sbjct: 555 gcacaattggagg 567
>gnl|LJGI|TC66342 homologue to UniRef100_A7PVI9 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 734
Score = 327 bits (165), Expect = 3e-89
Identities = 165/165 (100%)
Strand = Plus / Plus
Query: 1 atgttcccaaacgaagcatcgctatctggtgttgagccactcatgcagaaaatccagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atgttcccaaacgaagcatcgctatctggtgttgagccactcatgcagaaaatccagaac 258
Query: 61 gagattcggactgttgatgctggaatcttatctgctgttcgccaacagagtaattcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagattcggactgttgatgctggaatcttatctgctgttcgccaacagagtaattcagga 318
Query: 121 accaaggcgaaagaagatctcgctgccgctacgtgtgccgttgag 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 accaaggcgaaagaagatctcgctgccgctacgtgtgccgttgag 363
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 184 gtctctgctgttgaacagcttcaagtcatggcttcaaaacgccaatataaagaggcagct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gtctctgctgttgaacagcttcaagtcatggcttcaaaacgccaatataaagaggcagct 573
Query: 244 gcacaattggagg 256
|||||||||||||
Sbjct: 574 gcacaattggagg 586