Miyakogusa Predicted Gene

Lj4g3v0047620.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0047620.1 Non Chatacterized Hit- tr|I1KNQ8|I1KNQ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.07,0,dnaX_nterm:
DNA polymerase III, subunit gamma and ,DNA polymerase III, subunit
gamma/ tau; P-loop co,gene.g51442.t1.1
         (2133 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP057698 similar to UniRef100_Q0WNH1 Cluster: STICHEL; ...   565   e-160

>gnl|LJGI|BP057698 similar to UniRef100_Q0WNH1 Cluster: STICHEL; n=1; Arabidopsis
           thaliana|Rep: STICHEL - Arabidopsis thaliana (Mouse-ear
           cress), partial (11%)
          Length = 532

 Score =  565 bits (285), Expect = e-160
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcgggtgtctgacccgagcaagctccacctcaagaaggagctcacccaaattcgaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atgcgggtgtctgacccgagcaagctccacctcaagaaggagctcacccaaattcgaaaa 307

                                                                       
Query: 61  gctgctcgtgtattgagggatcctggcacaacatcttcctggaaatcacccctcagctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gctgctcgtgtattgagggatcctggcacaacatcttcctggaaatcacccctcagctcc 367

                                                                       
Query: 121 tcaagatctgtagctgcatggaaggacagtgggagtacaaggttcactgccactgccaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tcaagatctgtagctgcatggaaggacagtgggagtacaaggttcactgccactgccaac 427

                                                                       
Query: 181 cccaattctcaacttgattcagcactgccaccttctatcaatgataaagacaagagggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cccaattctcaacttgattcagcactgccaccttctatcaatgataaagacaagagggtc 487

                                                        
Query: 241 ttcttgtataactggaagaattacaaatcgtctagtgaaaagagt 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttcttgtataactggaagaattacaaatcgtctagtgaaaagagt 532