Miyakogusa Predicted Gene
- Lj4g3v0037530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0037530.1 Non Chatacterized Hit- tr|I1KNQ8|I1KNQ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.13,0,seg,NULL;
DNA_pol3_delta2,NULL; DNA_pol3_gamma3,DNA polymerase III, gamma
subunit, domain III; dnaX_,CUFF.46552.1
(3753 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82655 similar to UniRef100_A7QCE6 Cluster: Chromosome... 1384 0.0
gnl|LJGI|BP057698 similar to UniRef100_Q0WNH1 Cluster: STICHEL; ... 583 e-165
gnl|LJGI|TC78900 345 1e-93
gnl|LJGI|BW597039 UniRef100_A9V3V1 Cluster: Predicted protein; n... 165 2e-39
>gnl|LJGI|TC82655 similar to UniRef100_A7QCE6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 708
Score = 1384 bits (698), Expect = 0.0
Identities = 705/706 (99%), Gaps = 1/706 (0%)
Strand = Plus / Plus
Query: 2665 gatggtttcatcaagagaccgaagccgtcaaatagccctgctagctccacagtggtctca 2724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gatggtttcatcaagagaccgaagccgtcaaatagccctgctagctccacagtggtctca 62
Query: 2725 tctgatgatcttattgttgggaatgcaatgtttagatgcatagattcagggcagttaggt 2784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tctgatgatcttattgttgggaatgcaatgtttagatgcatagattcagggcagttaggt 122
Query: 2785 gacatttgggcacattgtattgagaggtgtcactctaagacattaaggcagctgctacac 2844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gacatttgggcacattgtattgagaggtgtcactctaagacattaaggcagctgctacac 182
Query: 2845 aatcatggaaagcttgtgtccttatgtgaagttgaaggtgttctggcagcatatgttgca 2904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aatcatggaaagcttgtgtccttatgtgaagttgaaggtgttctggcagcatatgttgca 242
Query: 2905 tttggggatggagacattaaacttagggctgagaggtttttaagaagcattacaaactcc 2964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tttggggatggagacattaaacttagggctgagaggtttttaagaagcattacaaactcc 302
Query: 2965 atggaaatggttcttagacgcaatgtggaggtcagaattatccacttgccagatgaaggt 3024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atggaaatggttcttagacgcaatgtggaggtcagaattatccacttgccagatgaaggt 362
Query: 3025 gaaattcagattaatccaccgggtgaaaaccaggcagagtcaaaaatggcaagtgcgaag 3084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaaattcagattaatccaccgggtgaaaaccaggcagagtcaaaaatggcaagtgcgaag 422
Query: 3085 gaacaaagacgaggtcatatgaatggaacagagtcttattctaatttgcctcctgtactg 3144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaacaaagacgaggtcatatgaatggaacagagtcttattctaatttgcctcctgtactg 482
Query: 3145 gatggaaaacttcaatctgccactagttcatcagatattcgggctgaaggaaatgttacg 3204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gatggaaaacttcaatctgccactagttcatcagatattcgggctgaaggaaatgttacg 542
Query: 3205 agagagaggagacaggataatccaatgcagcgaattgagtccatcattcgggaacaaagg 3264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agagagaggagacaggataatccaatgcagcgaattgagtccatcattcgggaacaaagg 602
Query: 3265 ttggaaactgcctggttacaggctg-ttgaaaaaggttcccctggatcattgagtcgtct 3323
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 603 ttggaaactgcctggttacaggctgcttgaaaaaggttcccctggatcattgagtcgtct 662
Query: 3324 gagacctgagaagaatcaggtcctgccgcaggatggcatctactgc 3369
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gagacctgagaagaatcaggtcctgccgcaggatggcatctactgc 708
>gnl|LJGI|BP057698 similar to UniRef100_Q0WNH1 Cluster: STICHEL; n=1; Arabidopsis
thaliana|Rep: STICHEL - Arabidopsis thaliana (Mouse-ear
cress), partial (11%)
Length = 532
Score = 583 bits (294), Expect = e-165
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 atgtcggaaatgcgggtgtctgacccgagcaagctccacctcaagaaggagctcacccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atgtcggaaatgcgggtgtctgacccgagcaagctccacctcaagaaggagctcacccaa 298
Query: 61 attcgaaaagctgctcgtgtattgagggatcctggcacaacatcttcctggaaatcaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 attcgaaaagctgctcgtgtattgagggatcctggcacaacatcttcctggaaatcaccc 358
Query: 121 ctcagctcctcaagatctgtagctgcatggaaggacagtgggagtacaaggttcactgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctcagctcctcaagatctgtagctgcatggaaggacagtgggagtacaaggttcactgcc 418
Query: 181 actgccaaccccaattctcaacttgattcagcactgccaccttctatcaatgataaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 actgccaaccccaattctcaacttgattcagcactgccaccttctatcaatgataaagac 478
Query: 241 aagagggtcttcttgtataactggaagaattacaaatcgtctagtgaaaagagt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aagagggtcttcttgtataactggaagaattacaaatcgtctagtgaaaagagt 532
>gnl|LJGI|TC78900
Length = 356
Score = 345 bits (174), Expect = 1e-93
Identities = 177/178 (99%)
Strand = Plus / Plus
Query: 3576 tctgggatatgagtccagctccagaccaggaggttgtggatttttatgttggaacaagtc 3635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgggatatgagtccagctccagaccaggaggttgtggatttttatgttggaacaagtc 60
Query: 3636 caagactaaaagggtagttaaggtgaaaggcaccccagttagagcgcgtaaagctggttg 3695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagactaaaagggtagttaaggtgaaaggcaccccagttagagcgcgtaaagctggttg 120
Query: 3696 tttaacgttgtttggtgaatgtggtggtaagacaaagaaaaaggagcggagaagataa 3753
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 tttaacgttgtttggtgaatgtggtggtaagaccaagaaaaaggagcggagaagataa 178
>gnl|LJGI|BW597039 UniRef100_A9V3V1 Cluster: Predicted protein; n=1; Monosiga
brevicollis MX1|Rep: Predicted protein - Monosiga
brevicollis MX1, partial (10%)
Length = 472
Score = 165 bits (83), Expect = 2e-39
Identities = 182/215 (84%)
Strand = Plus / Plus
Query: 3536 tgcatgacaacagtttagcaacaatttctggaaaagataatctgggatatgagtccagct 3595
|||||||| |||||||| |||| ||||||||||||||||||||| |||||| ||| ||
Sbjct: 60 tgcatgaccacagtttaacaactatttctggaaaagataatctgagatatgtgtctctct 119
Query: 3596 ccagaccaggaggttgtggatttttatgttggaacaagtccaagactaaaagggtagtta 3655
||| ||| |||| |||| ||||||||||| |||| || |||| ||||||||||||||||
Sbjct: 120 ccacaccgagagggtgtgtatttttatgtttgaacgagcccaacactaaaagggtagtta 179
Query: 3656 aggtgaaaggcaccccagttagagcgcgtaaagctggttgtttaacgttgtttggtgaat 3715
|||| ||||||||| | ||| ||||| || |||||||||||| | ||||||||||| |
Sbjct: 180 gtgtgagaggcacccccgctagcgcgcgaaaggctggttgtttatctttgtttggtgagt 239
Query: 3716 gtggtggtaagacaaagaaaaaggagcggagaaga 3750
|||| ||| ||||||| ||||| ||||||| ||||
Sbjct: 240 gtgggggtgagacaaacaaaaaagagcggaaaaga 274