Miyakogusa Predicted Gene
- Lj4g3v0036510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0036510.1 tr|G7LJJ5|G7LJJ5_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_8g101580 PE=4
SV=1,26.89,2e-18,F-box,F-box domain, cyclin-like; FBA_1,F-box
associated domain, type 1; FBOX,F-box domain, cyclin-li,CUFF.46387.1
(1267 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76110 807 0.0
gnl|LJGI|DC596422 homologue to UniRef100_O04301 Cluster: Men-9a ... 159 5e-38
>gnl|LJGI|TC76110
Length = 544
Score = 807 bits (407), Expect = 0.0
Identities = 479/494 (96%), Gaps = 8/494 (1%)
Strand = Plus / Plus
Query: 1 atggagagagctgagaaaaagtgcgggttagggttccacatcctggaattcccacttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atggagagagctgagaaaaagtgcgggttagggttccacatcctggaattcccacttcac 110
Query: 61 atactctgtgatatcttcttcaagcttccggcgtggtccctcattcgctgcaccaccgtc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 111 atactctgtgatatcttcttcaagcttccggcgtggtccctcattcgccgcaccaccgtc 170
Query: 121 tgcaccgccttcaaaaacctcatcaccgacccttccttccgccaactctatatttctcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tgcaccgccttcaaaaacctcatcaccgacccttccttccgccaactctatatttctcga 230
Query: 181 gccccaaccacctg-tctcgt-cctctccgaccgc-cgctatgttt--cctgcatcgatt 235
|||||||||||||| |||||| ||||||||||||| ||||||| || |||||||||||
Sbjct: 231 gccccaaccacctggtctcgttcctctccgaccgcgcgctatggttgtcctgcatcgatg 290
Query: 236 gccgcc-tc-ctctgctccgcttccaattccaatcacggcacctcc-tcctgtctcgcca 292
|||||| || ||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 291 gccgccgtcgctctgctccgcttccaattccaatcacagcacctccgtcctgtctcgcca 350
Query: 293 ccatcggcaaaaccccatcttccacaactcgttctaattcgccgatctctgatcatggat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccatcggcaaaaccccatcttccacaactcgttctaattcgccgatctctgatcatggat 410
Query: 353 ccagaagaaggttcatcacaatcgattgcgggagacctgtcaatttggtcaattctgcta 412
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 411 ccagaagaaggttcatcacaatcgattgcgggagacctgtcaattaggtcaattctgcga 470
Query: 413 atgggttattgtgtttacgcacttttgggttcccccatgatcgcgctttatactacatct 472
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgggtgattgtgtttacgcacttttgggttcccccatgatcgcgctttatactacatct 530
Query: 473 gcaatccactctcg 486
||||||||||||||
Sbjct: 531 gcaatccactctcg 544
>gnl|LJGI|DC596422 homologue to UniRef100_O04301 Cluster: Men-9a protein; n=1; Silene
latifolia|Rep: Men-9a protein - Silene latifolia (White
campion) (Bladder campion), partial (6%)
Length = 412
Score = 159 bits (80), Expect = 5e-38
Identities = 80/80 (100%)
Strand = Plus / Minus
Query: 1188 tttgagctttctctcgctgaaggacatgcttaatgtcagggacaacaacaaagtggtcaa 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tttgagctttctctcgctgaaggacatgcttaatgtcagggacaacaacaaagtggtcaa 353
Query: 1248 tgtcagacgcctgcgttaag 1267
||||||||||||||||||||
Sbjct: 352 tgtcagacgcctgcgttaag 333