Miyakogusa Predicted Gene
- Lj4g3v0014220.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0014220.1 Non Chatacterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,43.14,6e-17,ATPases
associated with a variety of ce,AAA+ ATPase domain; C-terminal,
D2-small domain, of ClpB pr,,gene.g51420.t1.1
(1581 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protea... 605 e-172
gnl|LJGI|BP060969 similar to UniRef100_Q56X21 Cluster: CLP prote... 486 e-136
gnl|LJGI|DC594164 similar to UniRef100_A7QCD6 Cluster: Chromosom... 442 e-123
>gnl|LJGI|TC82758 similar to UniRef100_Q9LTA9 Cluster: CLP protease regulatory
subunit CLPX-like; n=1; Arabidopsis thaliana|Rep: CLP
protease regulatory subunit CLPX-like - Arabidopsis
thaliana (Mouse-ear cress), partial (35%)
Length = 1064
Score = 605 bits (305), Expect = e-172
Identities = 305/305 (100%)
Strand = Plus / Plus
Query: 516 agattcccctttgccgccaacgcccaaacagattttcaatgccctcaatcaatttgttgt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agattcccctttgccgccaacgcccaaacagattttcaatgccctcaatcaatttgttgt 618
Query: 576 gggtcaggaaaagcctaaaaagctgctttcggtcgctgtttacaaccactatatcaggtt 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gggtcaggaaaagcctaaaaagctgctttcggtcgctgtttacaaccactatatcaggtt 678
Query: 636 acgccttgcaacaactcagcctgagtctcaatcttccgatcaagacactgatttggttca 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 acgccttgcaacaactcagcctgagtctcaatcttccgatcaagacactgatttggttca 738
Query: 696 gcctgaaaaaagtaacgtcttgctcatcggtcccactggctcagggaagaccttgctcgc 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gcctgaaaaaagtaacgtcttgctcatcggtcccactggctcagggaagaccttgctcgc 798
Query: 756 caaaacgcttgcccggattgtcaatgttccatttgccattgctgatgctaccactttcac 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 caaaacgcttgcccggattgtcaatgttccatttgccattgctgatgctaccactttcac 858
Query: 816 gcagg 820
|||||
Sbjct: 859 gcagg 863
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 228 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 330
Query: 288 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 390
Query: 348 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 450
Query: 408 caagctctctcctcttcacggcactttcatcgagatcgcaagg 450
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caagctctctcctcttcacggcactttcatcgagatcgcaagg 493
Score = 317 bits (160), Expect = 1e-85
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 34 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 136
Query: 94 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 196
Query: 154 tcaaattcaacaaattcagggtatcagcggcgacacaagt 193
||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaaattcaacaaattcagggtatcagcggcgacacaagt 236
Score = 301 bits (152), Expect = 7e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 819 ggaagctgatttcgacgtggaattagctcagcgagggattgtctacgttgatgaagttga 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ggaagctgatttcgacgtggaattagctcagcgagggattgtctacgttgatgaagttga 972
Query: 879 taagattactaagaagggagaaagtttgaacattggaagggatgtatctggggagggggt 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 taagattactaagaagggagaaagtttgaacattggaagggatgtatctggggagggggt 1032
Query: 939 ccagcaggccttgctcaaaatgctggaaagca 970
||||||||||||||||||||||||||||||||
Sbjct: 1033 ccagcaggccttgctcaaaatgctggaaagca 1064
>gnl|LJGI|BP060969 similar to UniRef100_Q56X21 Cluster: CLP protease regulatory subunit
CLPX-like; n=2; Arabidopsis thaliana|Rep: CLP protease
regulatory subunit CLPX-like - Arabidopsis thaliana
(Mouse-ear cress), partial (30%)
Length = 462
Score = 486 bits (245), Expect = e-136
Identities = 260/265 (98%)
Strand = Plus / Minus
Query: 1317 tttcactgataatgctttgagattgattgcaaagaaagctatggcaaagaacactggtgc 1376
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 462 tttcactgataatgctttgagattgattgccaagaaagctatggccaagaacactggtgc 403
Query: 1377 tcgtggtttaagagccttattagaaaacattcttaccgaagcgatgtttgaggtccccga 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcgtggtttaagagccttattagaaaacattcttaccgaagcgatgtttgaggtccccga 343
Query: 1437 caaggctgatattggtaacatcgaaggggttctggttgatgaagaggctgttgggtcact 1496
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ccaggctgatattggtaacatcgaaggggttctggttgatgaagaggctgttgggtcact 283
Query: 1497 gaacggacatggatgtggagcaaaaatactatacagagataataatggctcattggaggg 1556
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaacggacatggatgtggagccaaaatactatacagagataataatggctcattggaggg 223
Query: 1557 tcaagcaagagccatatgtttgtaa 1581
|||||| ||||||||||||||||||
Sbjct: 222 tcaagccagagccatatgtttgtaa 198
>gnl|LJGI|DC594164 similar to UniRef100_A7QCD6 Cluster: Chromosome undetermined
scaffold_77, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_77, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 564
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 228 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cggtgatggtattgtttactacgaccacataagagccgacatgaactgccctcgttgctc 303
Query: 288 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagaaacatgtctgtcatcttctccaaccgacccttatccatttctggtcaccaaccggg 363
Query: 348 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctctatcaggccctcaatctctgcccctcttgcaaaaccgccttctacttcagacccct 423
Query: 408 caagctctctcctcttcacggcactttcatcgagatcgcaagg 450
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caagctctctcctcttcacggcactttcatcgagatcgcaagg 466
Score = 317 bits (160), Expect = 1e-85
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 34 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 cacccaattgtaaggagaagcaggctcatcgcctcgttcttattccactataactactac 109
Query: 94 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tactatccttcttccaaaattctcagtaacaacatcaaccacagtggcagtaatccccat 169
Query: 154 tcaaattcaacaaattcagggtatcagcggcgacacaagt 193
||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcaaattcaacaaattcagggtatcagcggcgacacaagt 209
Score = 89.7 bits (45), Expect = 5e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 516 agattcccctttgccgccaacgcccaaacagattttcaatgccct 560
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agattcccctttgccgccaacgcccaaacagattttcaatgccct 564