Miyakogusa Predicted Gene
- Lj3g3v3765550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3765550.1 Non Chatacterized Hit- tr|I1R4H9|I1R4H9_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,28.7,1e-17,coiled-coil,NULL; GB DEF: F15O4.40,NULL; FAMILY
NOT NAMED,NULL; seg,NULL,CUFF.46329.1
(2019 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58377 weakly similar to UniRef100_A7QXD9 Cluster: Chr... 993 0.0
gnl|LJGI|BP056560 similar to UniRef100_Q1VUV7 Cluster: Cytochrom... 702 0.0
>gnl|LJGI|TC58377 weakly similar to UniRef100_A7QXD9 Cluster: Chromosome undetermined
scaffold_221, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_221, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(18%)
Length = 849
Score = 993 bits (501), Expect = 0.0
Identities = 504/505 (99%)
Strand = Plus / Plus
Query: 1515 ttttcctgctaccttcagccctgacgacgtgatgactacagccagcattagtgaaagtag 1574
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ttttcctgctaccttcagccctgacgacgtgatgactacacccagcattagtgaaagtag 60
Query: 1575 ggattcatcaggcaagacagtgagtcatttccggacaggaccaaccaatcagtcagctaa 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggattcatcaggcaagacagtgagtcatttccggacaggaccaaccaatcagtcagctaa 120
Query: 1635 tcggacttcagaatcagttcatatcgaccaaataacctcagaagcagtgctttcaactac 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcggacttcagaatcagttcatatcgaccaaataacctcagaagcagtgctttcaactac 180
Query: 1695 ttcccttagtgggactgggacagacgtaagaagtcgtaaaagaagattgacattttatca 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcccttagtgggactgggacagacgtaagaagtcgtaaaagaagattgacattttatca 240
Query: 1755 ttctggacattttccaaatgtgaaccttgaacaagaatttgcacttgaatcaaagaaaga 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctggacattttccaaatgtgaaccttgaacaagaatttgcacttgaatcaaagaaaga 300
Query: 1815 atcagtggatggcgaggcaactatagatgttctatgtgatgatcagttttataatgatct 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcagtggatggcgaggcaactatagatgttctatgtgatgatcagttttataatgatct 360
Query: 1875 tgatcttgacgaattggaggcacaagcaacatcgcttctgaaagagaaatcagatttgtc 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgatcttgacgaattggaggcacaagcaacatcgcttctgaaagagaaatcagatttgtc 420
Query: 1935 aagtcacaagcaaactacagcccctcaatctcacgcaacaaaccttgatgtttttaggtc 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagtcacaagcaaactacagcccctcaatctcacgcaacaaaccttgatgtttttaggtc 480
Query: 1995 tccatcattcgaccttggcatatga 2019
|||||||||||||||||||||||||
Sbjct: 481 tccatcattcgaccttggcatatga 505
>gnl|LJGI|BP056560 similar to UniRef100_Q1VUV7 Cluster: Cytochrome oxidase assembly
protein; n=1; Psychroflexus torquis ATCC 700755|Rep:
Cytochrome oxidase assembly protein - Psychroflexus
torquis ATCC 700755, partial (5%)
Length = 460
Score = 702 bits (354), Expect = 0.0
Identities = 370/373 (99%), Gaps = 3/373 (0%)
Strand = Plus / Plus
Query: 960 ttgtacttctcctgtcagtaaaactcaaacccctttacttaagctgaagaattgtgcaat 1019
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 1 ttgtacttctcctgtcagtaaaactcaa--ccctttacttaagctgaagaat-gtgcaat 57
Query: 1020 tagaagaggacgcgtcttcctttctcaaatcgatgaagcccatacatatatcgctgaccc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tagaagaggacgcgtcttcctttctcaaatcgatgaagcccatacatatatcgctgaccc 117
Query: 1080 aagcttcagtgaagagtcacattcagcttgtggtgaaatgtctatgagcattaaacctgc 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aagcttcagtgaagagtcacattcagcttgtggtgaaatgtctatgagcattaaacctgc 177
Query: 1140 acagaaatttaaaaggttgcggaaagttgaagataccaagagtaatatgaatcagaaaga 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 acagaaatttaaaaggttgcggaaagttgaagataccaagagtaatatgaatcagaaaga 237
Query: 1200 caattttttggcttcaacagcaaactttttcgaatcatcttctcctgcctccaatcccac 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 caattttttggcttcaacagcaaactttttcgaatcatcttctcctgcctccaatcccac 297
Query: 1260 acactataagcatggccaaggtaaaaggaagtcaacacataatgtgagagaattcattga 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acactataagcatggccaaggtaaaaggaagtcaacacataatgtgagagaattcattga 357
Query: 1320 ggaggaagctgag 1332
|||||||||||||
Sbjct: 358 ggaggaagctgag 370