Miyakogusa Predicted Gene
- Lj3g3v3765450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3765450.1 Non Chatacterized Hit- tr|I3S6F5|I3S6F5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.8,0,coiled-coil,NULL; seg,NULL; SNARE_assoc,SNARE associated
Golgi protein; UNCHARACTERIZED,NULL,CUFF.46367.1
(996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68413 similar to UniRef100_A7Q813 Cluster: Chromosome... 1471 0.0
gnl|LJGI|AV425088 similar to UniRef100_A7Q813 Cluster: Chromosom... 260 1e-68
gnl|LJGI|GO012751 UniRef100_A7Q813 Cluster: Chromosome chr18 sca... 137 1e-31
gnl|LJGI|FS340019 similar to UniRef100_A7QI31 Cluster: Chromosom... 54 2e-06
gnl|LJGI|TC68569 similar to UniRef100_A9SIP0 Cluster: Predicted ... 54 2e-06
>gnl|LJGI|TC68413 similar to UniRef100_A7Q813 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1415
Score = 1471 bits (742), Expect = 0.0
Identities = 742/742 (100%)
Strand = Plus / Plus
Query: 255 cgacggcgacaagaaacaaccagactccgacactggcaccgctttgaagggtactctttt 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cgacggcgacaagaaacaaccagactccgacactggcaccgctttgaagggtactctttt 416
Query: 315 ggccggtgttttgctccttggttttgtcgggggttttgctgccgttggctatatctacag 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggccggtgttttgctccttggttttgtcgggggttttgctgccgttggctatatctacag 476
Query: 375 ggaccccatcaattccttcttgaatcagctctccctcttcatagaaggttatggtccaac 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ggaccccatcaattccttcttgaatcagctctccctcttcatagaaggttatggtccaac 536
Query: 435 tggatatgccatatttgtagctgtttatgctggattggagatccttgcaattcctgccat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tggatatgccatatttgtagctgtttatgctggattggagatccttgcaattcctgccat 596
Query: 495 ccctttaaccatgtcagctggacttctttttggatctgttacaggcactgtcatagtctc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ccctttaaccatgtcagctggacttctttttggatctgttacaggcactgtcatagtctc 656
Query: 555 tattagtggaacggtggcagcaagtgttgcgtttctaattgcaagatattttgctcgtga 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tattagtggaacggtggcagcaagtgttgcgtttctaattgcaagatattttgctcgtga 716
Query: 615 gcgtattctaaaactagtggaaggaaataagaagtttcttgcggtagacaaagcaattgg 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gcgtattctaaaactagtggaaggaaataagaagtttcttgcggtagacaaagcaattgg 776
Query: 675 agaaaatggcttcaaggttgtgaccctgcttcgtttgagccctttgctgccattttcttt 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 agaaaatggcttcaaggttgtgaccctgcttcgtttgagccctttgctgccattttcttt 836
Query: 735 ggggaattatttgtatggattgacatctgttaagtttcttccatatgtattgggaagttg 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ggggaattatttgtatggattgacatctgttaagtttcttccatatgtattgggaagttg 896
Query: 795 gttggggatgcttccaggaacttgggcttatgttagtgctggtgcttttggaagagcaat 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gttggggatgcttccaggaacttgggcttatgttagtgctggtgcttttggaagagcaat 956
Query: 855 aattcaagaagagtctgaacttaaagtattaggaggaaacagtcagctgctgacacttgg 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 aattcaagaagagtctgaacttaaagtattaggaggaaacagtcagctgctgacacttgg 1016
Query: 915 gctgggactgttggtcactgcattagctgctacatatgtcacacgacttgcgaaggatgc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gctgggactgttggtcactgcattagctgctacatatgtcacacgacttgcgaaggatgc 1076
Query: 975 tattaaagatatcgaatagact 996
||||||||||||||||||||||
Sbjct: 1077 tattaaagatatcgaatagact 1098
Score = 276 bits (139), Expect = 3e-73
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 84 atcccacagacgctttcacttcctcaccccatgctcatcccttagacagaccaaaaagca 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atcccacagacgctttcacttcctcaccccatgctcatcccttagacagaccaaaaagca 239
Query: 144 acagcaacagcaacagcagcaactcaccaagatcaacactgccccatctggcttcaagcg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acagcaacagcaacagcagcaactcaccaagatcaacactgccccatctggcttcaagcg 299
Query: 204 cttattcagtcccaagccc 222
|||||||||||||||||||
Sbjct: 300 cttattcagtcccaagccc 318
>gnl|LJGI|AV425088 similar to UniRef100_A7Q813 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 281
Score = 260 bits (131), Expect = 1e-68
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 255 cgacggcgacaagaaacaaccagactccgacactggcaccgctttgaagggtactctttt 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cgacggcgacaagaaacaaccagactccgacactggcaccgctttgaagggtactctttt 210
Query: 315 ggccggtgttttgctccttggttttgtcgggggttttgctgccgttggctatatctacag 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ggccggtgttttgctccttggttttgtcgggggttttgctgccgttggctatatctacag 270
Query: 375 ggaccccatca 385
|||||||||||
Sbjct: 271 ggaccccatca 281
Score = 159 bits (80), Expect = 4e-38
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 143 aacagcaacagcaacagcagcaactcaccaagatcaacactgccccatctggcttcaagc 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aacagcaacagcaacagcagcaactcaccaagatcaacactgccccatctggcttcaagc 62
Query: 203 gcttattcagtcccaagccc 222
||||||||||||||||||||
Sbjct: 63 gcttattcagtcccaagccc 82
>gnl|LJGI|GO012751 UniRef100_A7Q813 Cluster: Chromosome chr18 scaffold_61, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 570
Score = 137 bits (69), Expect = 1e-31
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 790 agttggttggggatgcttccaggaacttgggcttatgttagtgctggtgcttttggaaga 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 agttggttggggatgcttccaggaacttgggcttatgttagtgctggtgcttttggaaga 77
Query: 850 gcaataatt 858
|||||||||
Sbjct: 78 gcaataatt 86
>gnl|LJGI|FS340019 similar to UniRef100_A7QI31 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 694
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 140 agcaacagcaacagcaacagcagcaac 166
|||||||||||||||||||||||||||
Sbjct: 361 agcaacagcaacagcaacagcagcaac 387
>gnl|LJGI|TC68569 similar to UniRef100_A9SIP0 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(32%)
Length = 608
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 140 agcaacagcaacagcaacagcagcaac 166
|||||||||||||||||||||||||||
Sbjct: 368 agcaacagcaacagcaacagcagcaac 394