Miyakogusa Predicted Gene
- Lj3g3v3752080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3752080.1 Non Chatacterized Hit- tr|E1ZN80|E1ZN80_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,32.2,8e-18,seg,NULL,CUFF.46316.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71613 homologue to UniRef100_A7PBM8 Cluster: Chromoso... 1840 0.0
gnl|LJGI|TC80976 homologue to UniRef100_A2T1U1 Cluster: OR; n=1;... 644 0.0
gnl|LJGI|AV765393 similar to UniRef100_A2T1U1 Cluster: OR; n=1; ... 129 3e-29
gnl|LJGI|TC71701 similar to UniRef100_A7PPA7 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC71613 homologue to UniRef100_A7PBM8 Cluster: Chromosome chr16
scaffold_10, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (91%)
Length = 1101
Score = 1840 bits (928), Expect = 0.0
Identities = 938/940 (99%), Gaps = 1/940 (0%)
Strand = Plus / Plus
Query: 1 atgctctgtctgggtggtgcggtgtcgttttacagcgtgaaatgctttcagctgtacgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atgctctgtctgggtggtgcggtgtcgttttacagcgtgaaatgctttcagctgtacgat 80
Query: 61 tcccgttacagggacaacagattcctccatcaccatgtaaaccacacacccagatggcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tcccgttacagggacaacagattcctccatcaccatgtaaaccacacacccagatggcgg 140
Query: 121 cgcttcatggccatcgattccgaatcttcttttgcaccctcatcctccattgattctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cgcttcatggccatcgattccgaatcttcttttgcaccctcatcctccattgattctgat 200
Query: 181 gccaccgctgctgctggattctgcatcattgaaggccccgaaacggtgcaagattttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccaccgctgctgctggattctgcatcattgaaggccccgaaacggtgcaagattttgct 260
Query: 241 aagatggagcttcaagaaattcaggacaacattcgaagtcggaggaacaagatttttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatggagcttcaagaaattcaggacaacattcgaagtcggaggaacaagatttttctg 320
Query: 301 catatggaagaggtgcgtaggcttaggatacaacaaaggattaaaaatgctgaacttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catatggaagaggtgcgtaggcttaggatacaacaaaggattaaaaatgctgaacttgga 380
Query: 361 atttttaatgaagagcaagaaaatgaacttccaaatttcccatcattcattccattcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttaatgaagagcaagaaaatgaacttccaaatttcccatcattcattccattcttg 440
Query: 421 cctcctttgacttcagcaaacctcaagcagtattatgcaacctgtttt-tctcttattgc 479
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 441 cctcctttgacttcagcaaacctcaggcagtattatgcaacctgttttttctcttattgc 500
Query: 480 cggaataattctttttggtggtctccttgcacccagtttggaacttaagcttggaatagg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cggaataattctttttggtggtctccttgcacccagtttggaacttaagcttggaatagg 560
Query: 540 aggcacatcttatgcagattttattcaaaatatgcatctgcctatgcagttgagtgaggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggcacatcttatgcagattttattcaaaatatgcatctgcctatgcagttgagtgaggt 620
Query: 600 tgatcccatcgtggcatcattctctggaggagcagttggggtaatctctgcattaatggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgatcccatcgtggcatcattctctggaggagcagttggggtaatctctgcattaatggt 680
Query: 660 tgttgagataaacaatgtgaaacagcaagagcaaaaaagatgcaaatactgtcttggcac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgttgagataaacaatgtgaaacagcaagagcaaaaaagatgcaaatactgtcttggcac 740
Query: 720 tggatatcttgcatgtgctcgctgttcaagcacaggcgcacttgttctgattgaaccagt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggatatcttgcatgtgctcgctgttcaagcacaggcgcacttgttctgattgaaccagt 800
Query: 780 gtccacagttaatggtggagatctgcctctatcaccaccaaaaactgagagatgttcaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtccacagttaatggtggagatctgcctctatcaccaccaaaaactgagagatgttcaaa 860
Query: 840 ttgctctggatctggcaaggttatgtgtccaacatgtctttgtactggaatggcaatggc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttgctctggatctggcaaggttatgtgtccaacatgtctttgtactggaatggcaatggc 920
Query: 900 aagcgaacatgatccacgaattgatccttttgattaaagg 939
||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 aagcgaacatgatccacgaattgatccttttgattaaagg 960
>gnl|LJGI|TC80976 homologue to UniRef100_A2T1U1 Cluster: OR; n=1; Brassica oleracea
var. botrytis|Rep: OR - Brassica oleracea var. botrytis
(Cauliflower), partial (49%)
Length = 840
Score = 644 bits (325), Expect = 0.0
Identities = 352/357 (98%), Gaps = 3/357 (0%)
Strand = Plus / Plus
Query: 429 gacttcagcaaacctcaagcagtattatgcaacctgtttttctcttattgccggaataat 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gacttcagcaaacctcaagcagtattatgcaacctgtttttctcttattgccggaataat 546
Query: 489 tctttttggtggtctccttgcacccagtttggaacttaagcttggaataggaggcacatc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tctttttggtggtctccttgcacccagtttggaacttaagcttggaataggaggcacatc 606
Query: 549 ttatgcagattttattcaaaatatgcatctgcctatgcagttgagtgaggttgatcccat 608
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttatgcaggttttattcaaaatatgcatctgcctatgcagttgagtgaggttgatcccat 666
Query: 609 cgtggcatcattctctggaggagcagttggggtaatctctgcattaatggttgttgagat 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 cgtggcatcattctctggaggagcagttggggtaatctctgcattaatggttgttgagat 726
Query: 669 aaacaatgtgaaacagcaagagcaaaaaagatgcaaatactgtcttggcactggatatct 728
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 aaacaatgtgaaacagcaagagc-aaaaagatgcaaatactgtcttggcactggatatct 785
Query: 729 tgcatgtgctcgctgttcaagcacaggcgcacttgttctgattgaaccagtgtccac 785
||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||
Sbjct: 786 tgcatgtgctcgctgttcaagcaca-gcgcacttgttccgattgaa-cagtgtccac 840
Score = 611 bits (308), Expect = e-174
Identities = 311/312 (99%)
Strand = Plus / Plus
Query: 1 atgctctgtctgggtggtgcggtgtcgttttacagcgtgaaatgctttcagctgtacgat 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 176 atgctctgtctgggtggtgcggtgtcgttatacagcgtgaaatgctttcagctgtacgat 235
Query: 61 tcccgttacagggacaacagattcctccatcaccatgtaaaccacacacccagatggcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tcccgttacagggacaacagattcctccatcaccatgtaaaccacacacccagatggcgg 295
Query: 121 cgcttcatggccatcgattccgaatcttcttttgcaccctcatcctccattgattctgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cgcttcatggccatcgattccgaatcttcttttgcaccctcatcctccattgattctgat 355
Query: 181 gccaccgctgctgctggattctgcatcattgaaggccccgaaacggtgcaagattttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gccaccgctgctgctggattctgcatcattgaaggccccgaaacggtgcaagattttgct 415
Query: 241 aagatggagcttcaagaaattcaggacaacattcgaagtcggaggaacaagatttttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aagatggagcttcaagaaattcaggacaacattcgaagtcggaggaacaagatttttctg 475
Query: 301 catatggaagag 312
||||||||||||
Sbjct: 476 catatggaagag 487
>gnl|LJGI|AV765393 similar to UniRef100_A2T1U1 Cluster: OR; n=1; Brassica oleracea
var. botrytis|Rep: OR - Brassica oleracea var. botrytis
(Cauliflower), partial (11%)
Length = 226
Score = 129 bits (65), Expect = 3e-29
Identities = 98/109 (89%)
Strand = Plus / Minus
Query: 831 atgttcaaattgctctggatctggcaaggttatgtgtccaacatgtctttgtactggaat 890
|||||| ||||||| ||||| |||||||||||||||||| ||| || ||||| |||||||
Sbjct: 223 atgttccaattgctttggatttggcaaggttatgtgtcccacaagtttttgttctggaat 164
Query: 891 ggcaatggcaagcgaacatgatccacgaattgatccttttgattaaagg 939
|||||||||||||||||||||||| ||||||||||| ||| |||||||
Sbjct: 163 ggcaatggcaagcgaacatgatccccgaattgatccctttttttaaagg 115
>gnl|LJGI|TC71701 similar to UniRef100_A7PPA7 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (92%)
Length = 1223
Score = 54.0 bits (27), Expect = 2e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 856 aaggttatgtgtccaacatgtctttgtactggaatggcaatggcaagcgaacatgatcca 915
||||||||||| ||||| || ||||| ||||| ||| ||||||||||||||||| | |
Sbjct: 982 aaggttatgtgcccaacctgcctttgcactgggatgaagatggcaagcgaacatgaccta 1041
Query: 916 cgaattgatcc 926
|| ||||||||
Sbjct: 1042 cggattgatcc 1052