Miyakogusa Predicted Gene

Lj3g3v3751950.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3751950.1 tr|Q2HU53|Q2HU53_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g1,23.26,4e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR: pentatricopeptide repeat
domain,Pent,CUFF.46267.1
         (1566 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS341003 weakly similar to UniRef100_A7Q4W7 Cluster: Ch...  1134   0.0  

>gnl|LJGI|FS341003 weakly similar to UniRef100_A7Q4W7 Cluster: Chromosome undetermined
           scaffold_51, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (29%)
          Length = 743

 Score = 1134 bits (572), Expect = 0.0
 Identities = 575/576 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgataggcactctaagcttccctccaaatcccactaccttgtgctctgctaagaagaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atgataggcactctaagcttccctccaaatcccactaccttgtgctctgctaagaagaac 227

                                                                       
Query: 61  accaacaaagataaaagcaagaaatacagaaagtggcaaagtgaagatagaagcaacact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 accaacaaagataaaagcaagaaatacagaaagtggcaaagtgaagatagaagcaacact 287

                                                                       
Query: 121 ctttctttcccaaaaccaaaatcaaccccactcctcatccatcaacaaccttatccccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ctttctttcccaaaaccaaaatcaaccccactcctcatccatcaacaaccttatccccaa 347

                                                                       
Query: 181 actaaacaccaagcaattgaacaagtactcaaagacattgaagcttctatagagaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 actaaacaccaagcaattgaacaagtactcaaagacattgaagcttctatagagaaaggc 407

                                                                       
Query: 241 atcagaattgacccagaaatctatgcttctttgctagaaacctgctaccgttcccaagcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atcagaattgacccagaaatctatgcttctttgctagaaacctgctaccgttcccaagcc 467

                                                                       
Query: 301 attcgtcatggtagccaagttcaccgcctcatacctacagtccttttgcgtaagaatgtt 360
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 attcgtcatggtatccaagttcaccgcctcatacctacagtccttttgcgtaagaatgtt 527

                                                                       
Query: 361 ggcgtcacctccaagcttgtgaggttgtacgcttcttttgggtacatggaagatgcccac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggcgtcacctccaagcttgtgaggttgtacgcttcttttgggtacatggaagatgcccac 587

                                                                       
Query: 421 gacctgtttgatcaaatgtctcagagggatgcatctgcatttccctggaattctcttatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gacctgtttgatcaaatgtctcagagggatgcatctgcatttccctggaattctcttatc 647

                                                                       
Query: 481 tcagggtatgctcaactgggtctctatgatgatgccattgcgctctacttccaaatggtg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tcagggtatgctcaactgggtctctatgatgatgccattgcgctctacttccaaatggtg 707

                                               
Query: 541 gaagagggtgtggagcctgacttgttcacgtttcct 576
           ||||||||||||||||||||||||||||||||||||
Sbjct: 708 gaagagggtgtggagcctgacttgttcacgtttcct 743