Miyakogusa Predicted Gene

Lj3g3v3751920.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3751920.1 Non Chatacterized Hit- tr|C6T4C5|C6T4C5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58036 PE,58.08,0,no
description,Pectinesterase inhibitor; seg,NULL; PME_inhib:
pectinesterase inhibitor domain,Pectin,CUFF.46264.1
         (688 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63863                                                       96   3e-19

>gnl|LJGI|TC63863 
          Length = 874

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 108/128 (84%)
 Strand = Plus / Plus

                                                                       
Query: 201 ctacattaaaacctcatgcagttcaaccacttacccttcaacatgctaccgatctttaca 260
           ||||||||||||||| ||||  |||||||| ||||| |||| |||||||  | ||||| |
Sbjct: 242 ctacattaaaacctcttgcatctcaaccacatacccatcaatatgctactcaactttata 301

                                                                       
Query: 261 cccctatgctttgaaaattgaagctaaccctttgaagctctgcaatgtttctctctcact 320
           |||||||||||  |||||||||||  | ||| |||| ||||||||| | |||||||||||
Sbjct: 302 cccctatgcttccaaaattgaagcagatcctctgaaactctgcaatatctctctctcact 361

                   
Query: 321 agccttaa 328
            |||||||
Sbjct: 362 cgccttaa 369



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 491 ttgataaagggtttcaggtcagcaacatcaagacgtgggtgagtgcagctatgaccgatg 550
           ||||||||  ||||||| | |||||||| ||||| ||||||||||| || || ||| |||
Sbjct: 535 ttgataaaaagtttcagattagcaacattaagacttgggtgagtgctgcaatcaccaatg 594

                                      
Query: 551 gtcaaacgtgttctgatgggtttgatg 577
            |||||| || | |||||| |||||||
Sbjct: 595 atcaaacttgctatgatggttttgatg 621



 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 601 gtgagggacaagatcagaaagaatgttttgaaggtgttgaggataacaagcaatgctttg 660
           ||||||||||| |||||||  |  |||||||| |||  |||||  || ||||||||||||
Sbjct: 642 gtgagggacaaaatcagaagcaccgttttgaatgtggcgaggaagactagcaatgctttg 701

                          
Query: 661 tatttcattaacaat 675
           |||||||| ||||||
Sbjct: 702 tatttcatcaacaat 716