Miyakogusa Predicted Gene

Lj3g3v3737720.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3737720.1 Non Chatacterized Hit- tr|I3S8M3|I3S8M3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Transcription factor, MADS-box; MADS BOX PROTEIN,NULL;
SRF-like,Transcription factor,,CUFF.46258.1
         (606 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57369 similar to UniRef100_A7PQ40 Cluster: Chromosome...  1178   0.0  
gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL1...    56   3e-07
gnl|LJGI|TC75220 homologue to UniRef100_A1XG54 Cluster: SOC1; n=...    52   4e-06

>gnl|LJGI|TC57369 similar to UniRef100_A7PQ40 Cluster: Chromosome chr18 scaffold_24,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_24, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (76%)
          Length = 933

 Score = 1178 bits (594), Expect = 0.0
 Identities = 603/606 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcgtggaaaggttcagctgaggcgaattgagaacccggtgcataggcaagttacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 atggctcgtggaaaggttcagctgaggcgaattgagaacccggtgcataggcaagttacc 230

                                                                       
Query: 61  ttctgcaagcggcgagcagggcttctgaagaaggctaaggagctttctgtgctgtgtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ttctgcaagcggcgagcagggcttctgaagaaggctaaggagctttctgtgctgtgtgat 290

                                                                       
Query: 121 gctgaaattggccttgtcattttctccgcgcaaggaaagctctatgaactcaccaccaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gctgaaattggccttgtcattttctccgcgcaaggaaagctctatgaactcaccaccaaa 350

                                                                       
Query: 181 ggaactatgcaagggctcatagagaggtacatgaattacacacgagaggctgaacctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggaactatgcaagggctcatagagaggtacatgaattacacacgagaggctgaacctgaa 410

                                                                       
Query: 241 gcagtcactcaagcgcgtcctctggatgctaaagaggaaaccaatgtgctaaaacaagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gcagtcactcaagcgcgtcctctggatgctaaagaggaaaccaatgtgctaaaacaagaa 470

                                                                       
Query: 301 atcgacaaattgcaaaagggtatcaggtatttgtttggaggaggattggggacaatgaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atcgacaaattgcaaaagggtatcaggtatttgtttggaggaggattggggacaatgaaa 530

                                                                       
Query: 361 atggatgaattacacgtgctggaaaagaatcttgaaacttggatttatcatgttcgctcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atggatgaattacacgtgctggaaaagaatcttgaaacttggatttatcatgttcgctcc 590

                                                                       
Query: 421 atgaagatgaacatcatgttacaagaaattcaagctttgagagataaggagggaacactt 480
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 591 atgaagatgaacatcatgttacaagaaattcaagctttgagtgataaggagggaacactt 650

                                                                       
Query: 481 aaggcggcaaataaatatcttcatgacatggttgtggagaatacttcagttactaacttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaggcggcaaataaatatcttcatgacatggttgtggagaatacttcagttactaacttt 710

                                                                       
Query: 541 gatccatttgctactgatcctttatacccactaattatacaagatggcggctttcagttc 600
           ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 711 gatccatttgctactgatcctttatacccactaattatacaagatgggggttttcagttc 770

                 
Query: 601 taggag 606
           ||||||
Sbjct: 771 taggag 776


>gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL11; n=1; Lotus
           japonicus|Rep: MADS box protein AGL11 - Lotus japonicus,
           complete
          Length = 983

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 79  gggcttctgaagaaggctaaggagctttctgtgctgtgtgatgctgaa 126
           |||||||||||||| ||| | ||||| || ||||||||||||||||||
Sbjct: 162 gggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctgaa 209


>gnl|LJGI|TC75220 homologue to UniRef100_A1XG54 Cluster: SOC1; n=1; Glycine max|Rep:
           SOC1 - Glycine max (Soybean), partial (35%)
          Length = 555

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 67/78 (85%), Gaps = 2/78 (2%)
 Strand = Plus / Plus

                                                                       
Query: 49  aggcaagttaccttctgcaagcggcg-agcagggcttctgaagaaggctaaggagctttc 107
           |||||||| |||||||  |||||||| ||| |||||||||||||||||    ||||||||
Sbjct: 380 aggcaagtgaccttctcaaagcggcgtagc-gggcttctgaagaaggcctttgagctttc 438

                             
Query: 108 tgtgctgtgtgatgctga 125
           |||||| ||||| |||||
Sbjct: 439 tgtgctttgtgaggctga 456