Miyakogusa Predicted Gene
- Lj3g3v3725550.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3725550.1 Non Chatacterized Hit- tr|I1L5P7|I1L5P7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33422
PE,86.29,0,KH_TYPE_1,K Homology domain, type 1; RRM,RNA recognition
motif domain; ZF_CCHC,Zinc finger, CCHC-typ,CUFF.46235.1
(1900 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79480 similar to UniRef100_Q0JDQ4 Cluster: Os04g03857... 850 0.0
gnl|LJGI|TC66513 homologue to UniRef100_A7P1Z1 Cluster: Chromoso... 821 0.0
gnl|LJGI|BI419204 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385... 779 0.0
gnl|LJGI|BP043392 527 e-149
gnl|LJGI|TC65234 homologue to UniRef100_A7P1Z2 Cluster: Chromoso... 484 e-135
gnl|LJGI|AV419431 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385... 396 e-109
>gnl|LJGI|TC79480 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385700 protein; n=1; Oryza
sativa Japonica Group|Rep: Os04g0385700 protein - Oryza
sativa subsp. japonica (Rice), partial (14%)
Length = 432
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 1084 gttatcaaggatcgaatgacagggttaagtaaaggatacgggtttgtgaagtatgctgat 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gttatcaaggatcgaatgacagggttaagtaaaggatacgggtttgtgaagtatgctgat 63
Query: 1144 ataacgatggcaaacaatgcaatcttggccatgaatggttatcgccttgagggtcgaacc 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ataacgatggcaaacaatgcaatcttggccatgaatggttatcgccttgagggtcgaacc 123
Query: 1204 attgctgttcgagttgcaggcaagcctcctcagcctgttgtacctcctggaccaccagcg 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 attgctgttcgagttgcaggcaagcctcctcagcctgttgtacctcctggaccaccagcg 183
Query: 1264 tctggtatgcccacttaccctgttccgagccagccacatggtgcgtatccatcgcagcag 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tctggtatgcccacttaccctgttccgagccagccacatggtgcgtatccatcgcagcag 243
Query: 1324 caatatgccgccggcggtccccttggggttgctcccccgacaaactatggtggcacccca 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 caatatgccgccggcggtccccttggggttgctcccccgacaaactatggtggcacccca 303
Query: 1384 gtcccatgggctcctcccgttcctcctccatatgccccttatgcacctcccccacctggg 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtcccatgggctcctcccgttcctcctccatatgccccttatgcacctcccccacctggg 363
Query: 1444 tcgactatgtatcctcctatgcaaggtcaacctatgcctccttatggtgttcattatcct 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcgactatgtatcctcctatgcaaggtcaacctatgcctccttatggtgttcattatcct 423
Query: 1504 cctccccct 1512
|||||||||
Sbjct: 424 cctccccct 432
>gnl|LJGI|TC66513 homologue to UniRef100_A7P1Z1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 844
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1487 atggtgttcattatcctcctccccctggtgccccaccccagcctgcaacttctaatgagc 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggtgttcattatcctcctccccctggtgccccaccccagcctgcaacttctaatgagc 60
Query: 1547 agcaaagttaccctcccggagtgcagtctgataatagtacctctactcagtctataccag 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcaaagttaccctcccggagtgcagtctgataatagtacctctactcagtctataccag 120
Query: 1607 ccagtatgtacgggaacacagtaccttcaatgcctccaccacctcaacctacatatcctc 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccagtatgtacgggaacacagtaccttcaatgcctccaccacctcaacctacatatcctc 180
Query: 1667 catcatatggatatccaccttactacaatgcagttcctccaccacccccacctgcacctg 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catcatatggatatccaccttactacaatgcagttcctccaccacccccacctgcacctg 240
Query: 1727 ttacttcagaacaatcccccagctttggtaatgtgccttgggccagcaatcccatggtgc 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacttcagaacaatcccccagctttggtaatgtgccttgggccagcaatcccatggtgc 300
Query: 1787 caccccctccttcagataatcaatcccagcccagggctacaaacccacctttgcctcctg 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caccccctccttcagataatcaatcccagcccagggctacaaacccacctttgcctcctg 360
Query: 1847 cttcatcagctggtgattccgagtatgagaagttcatggcagagatgaaatgat 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttcatcagctggtgattccgagtatgagaagttcatggcagagatgaaatgat 414
>gnl|LJGI|BI419204 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385700 protein; n=1; Oryza
sativa Japonica Group|Rep: Os04g0385700 protein - Oryza
sativa subsp. japonica (Rice), partial (22%)
Length = 393
Score = 779 bits (393), Expect = 0.0
Identities = 393/393 (100%)
Strand = Plus / Plus
Query: 775 gctactgggaagaagatggatgatgagtatcagaactttttagcagagttgggaggtacg 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctactgggaagaagatggatgatgagtatcagaactttttagcagagttgggaggtacg 60
Query: 835 gttccagaatccgcaactaagcaaaccagtacactggcaattggttcgggcaattccgga 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttccagaatccgcaactaagcaaaccagtacactggcaattggttcgggcaattccgga 120
Query: 895 agcaaccctccttgggccaacaacaatggtggctccactggtggtgcagcacaagctgga 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcaaccctccttgggccaacaacaatggtggctccactggtggtgcagcacaagctgga 180
Query: 955 ttaggggctggtgcagttaagaaggaaatcgatgatacaaatttgtacattgggtatttg 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaggggctggtgcagttaagaaggaaatcgatgatacaaatttgtacattgggtatttg 240
Query: 1015 ccaccaactcttgaggatgatggcctgatccaattgtttcaacagtttggtgagattgtt 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaccaactcttgaggatgatggcctgatccaattgtttcaacagtttggtgagattgtt 300
Query: 1075 atggctaaagttatcaaggatcgaatgacagggttaagtaaaggatacgggtttgtgaag 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggctaaagttatcaaggatcgaatgacagggttaagtaaaggatacgggtttgtgaag 360
Query: 1135 tatgctgatataacgatggcaaacaatgcaatc 1167
|||||||||||||||||||||||||||||||||
Sbjct: 361 tatgctgatataacgatggcaaacaatgcaatc 393
>gnl|LJGI|BP043392
Length = 442
Score = 527 bits (266), Expect = e-149
Identities = 266/266 (100%)
Strand = Plus / Minus
Query: 1635 aatgcctccaccacctcaacctacatatcctccatcatatggatatccaccttactacaa 1694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aatgcctccaccacctcaacctacatatcctccatcatatggatatccaccttactacaa 383
Query: 1695 tgcagttcctccaccacccccacctgcacctgttacttcagaacaatcccccagctttgg 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgcagttcctccaccacccccacctgcacctgttacttcagaacaatcccccagctttgg 323
Query: 1755 taatgtgccttgggccagcaatcccatggtgccaccccctccttcagataatcaatccca 1814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 taatgtgccttgggccagcaatcccatggtgccaccccctccttcagataatcaatccca 263
Query: 1815 gcccagggctacaaacccacctttgcctcctgcttcatcagctggtgattccgagtatga 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcccagggctacaaacccacctttgcctcctgcttcatcagctggtgattccgagtatga 203
Query: 1875 gaagttcatggcagagatgaaatgat 1900
||||||||||||||||||||||||||
Sbjct: 202 gaagttcatggcagagatgaaatgat 177
>gnl|LJGI|TC65234 homologue to UniRef100_A7P1Z2 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 696
Score = 484 bits (244), Expect = e-135
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1 atgggaggtattgaattcgatcctgagattcaagctctgaatagcaggcttcttgagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atgggaggtattgaattcgatcctgagattcaagctctgaatagcaggcttcttgagatt 512
Query: 61 agtcgaatgttgcagtccggtttgcctttggatgatcgtcctgaaggtgctcgatctcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agtcgaatgttgcagtccggtttgcctttggatgatcgtcctgaaggtgctcgatctcct 572
Query: 121 tcgcctgaacctatatatgataacatgggaattaggatcaatacgagagagtatcgtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcgcctgaacctatatatgataacatgggaattaggatcaatacgagagagtatcgtgct 632
Query: 181 cgtgagaggttgcagaaagagaggcaagaaattatatcgcaaatcatcaagaaaaaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cgtgagaggttgcagaaagagaggcaagaaattatatcgcaaatcatcaagaaaaaccct 692
Query: 241 gcgt 244
||||
Sbjct: 693 gcgt 696
>gnl|LJGI|AV419431 similar to UniRef100_Q0JDQ4 Cluster: Os04g0385700 protein; n=1; Oryza
sativa Japonica Group|Rep: Os04g0385700 protein - Oryza
sativa subsp. japonica (Rice), partial (10%)
Length = 276
Score = 396 bits (200), Expect = e-109
Identities = 200/200 (100%)
Strand = Plus / Plus
Query: 905 cttgggccaacaacaatggtggctccactggtggtgcagcacaagctggattaggggctg 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cttgggccaacaacaatggtggctccactggtggtgcagcacaagctggattaggggctg 136
Query: 965 gtgcagttaagaaggaaatcgatgatacaaatttgtacattgggtatttgccaccaactc 1024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gtgcagttaagaaggaaatcgatgatacaaatttgtacattgggtatttgccaccaactc 196
Query: 1025 ttgaggatgatggcctgatccaattgtttcaacagtttggtgagattgttatggctaaag 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttgaggatgatggcctgatccaattgtttcaacagtttggtgagattgttatggctaaag 256
Query: 1085 ttatcaaggatcgaatgaca 1104
||||||||||||||||||||
Sbjct: 257 ttatcaaggatcgaatgaca 276