Miyakogusa Predicted Gene
- Lj3g3v3724410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3724410.1 CUFF.46222.1
(1491 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS360087 weakly similar to UniRef100_A7PKI1 Cluster: Ch... 690 0.0
gnl|LJGI|FS346553 similar to UniRef100_A7QUZ0 Cluster: Chromosom... 161 2e-38
gnl|LJGI|BP032005 weakly similar to UniRef100_Q8VYT5 Cluster: F-... 94 3e-18
gnl|LJGI|FS319687 similar to UniRef100_A7QUZ0 Cluster: Chromosom... 86 7e-16
>gnl|LJGI|FS360087 weakly similar to UniRef100_A7PKI1 Cluster: Chromosome chr15
scaffold_19, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_19, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (24%)
Length = 704
Score = 690 bits (348), Expect = 0.0
Identities = 351/352 (99%)
Strand = Plus / Minus
Query: 1140 tgtatgcaggactgccagggagattattcttcaggactgctggggattggataatagcat 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tgtatgcaggactgccagggagattattcttcaggactgctggggattggataatagcat 645
Query: 1200 gttcagtcttgcagttatttgcaggcgggtaaaattgatttgcttagaaggatgctcatt 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gttcagtcttgcagttatttgcaggcgggtaaaattgatttgcttagaaggatgctcatt 585
Query: 1260 gctaacaacagaaggtttggagtctgtaattcatttgtggaaggaacttcagagtcttag 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gctaacaacagaaggtttggagtctgtaattcatttgtggaaggaacttcagagtcttag 525
Query: 1320 agtagtctcatgtaagcatatcaaggacagtgaaatctctcctgcacttgcaacctcgtt 1379
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 524 agtagtctcatgtaagcatatcaaggacagtgaaatctctcctgcacttgcaaccttgtt 465
Query: 1380 taccaccctcaaagaattgaaatggagtccagacaccaagtcactacttccatcaagact 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 taccaccctcaaagaattgaaatggagtccagacaccaagtcactacttccatcaagact 405
Query: 1440 tgtagggataagcataggaaagaaaggcgggaaatttttcaaaaagacatga 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgtagggataagcataggaaagaaaggcgggaaatttttcaaaaagacatga 353
>gnl|LJGI|FS346553 similar to UniRef100_A7QUZ0 Cluster: Chromosome chr16 scaffold_182,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_182, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 600
Score = 161 bits (81), Expect = 2e-38
Identities = 252/309 (81%)
Strand = Plus / Minus
Query: 1172 aggactgctggggattggataatagcatgttcagtcttgcagttatttgcaggcgggtaa 1231
||||||||||||| ||||||||||| |||| ||||| ||| | |||||||||||||||
Sbjct: 600 aggactgctgggggttggataatagtgtgttgagtctcgcaatcatttgcaggcgggtag 541
Query: 1232 aattgatttgcttagaaggatgctcattgctaacaacagaaggtttggagtctgtaattc 1291
||||| || ||||||||||||||||||||| ||||| |||||||||||| |||||
Sbjct: 540 aattgtgttacttagaaggatgctcattgcttacaacggaaggtttggagctggtaatag 481
Query: 1292 atttgtggaaggaacttcagagtcttagagtagtctcatgtaagcatatcaaggacagtg 1351
||| |||||||| ||||| | |||||||| || || ||||| |||| ||||| ||||
Sbjct: 480 attcttggaaggagcttcaatgccttagagttgtttcgtgtaaaaatataaaggatagtg 421
Query: 1352 aaatctctcctgcacttgcaacctcgtttaccaccctcaaagaattgaaatggagtccag 1411
| || | |||| |||| ||||||| ||| |||| |||||||| |||| |||||| ||||
Sbjct: 420 atatttttcctacactcgcaaccttgttcgccacgctcaaagagttgagatggaggccag 361
Query: 1412 acaccaagtcactacttccatcaagacttgtagggataagcataggaaagaaaggcggga 1471
|||| || | || || ||||||| |||| | ||||||||| ||||||||||| || |
Sbjct: 360 acacaaaaccccttctgtcatcaagtcttgaggagataagcatgggaaagaaaggtggta 301
Query: 1472 aatttttca 1480
|||||||||
Sbjct: 300 aatttttca 292
>gnl|LJGI|BP032005 weakly similar to UniRef100_Q8VYT5 Cluster: F-box protein At5g07670;
n=1; Arabidopsis thaliana|Rep: F-box protein At5g07670 -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 449
Score = 93.7 bits (47), Expect = 3e-18
Identities = 122/147 (82%)
Strand = Plus / Minus
Query: 1078 gaacggcttcatttgcagaaatgccaattacgggacaagaagagcattgcagctatgttt 1137
|||||| | ||||||||||| ||||| || ||||| ||||| ||| || |||| | ||
Sbjct: 427 gaacggttgcatttgcagaagtgccagttgcgggataagaacggcactggagctgttttc 368
Query: 1138 tctgtatgcaggactgccagggagattattcttcaggactgctggggattggataatagc 1197
||||| ||||| ||||||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 367 tctgtttgcagagctgccagggaggtcattcttcaggactgctgggggttggataatagt 308
Query: 1198 atgttcagtcttgcagttatttgcagg 1224
|||| ||||| ||| | |||||||||
Sbjct: 307 gtgttgagtctcgcaatcatttgcagg 281
>gnl|LJGI|FS319687 similar to UniRef100_A7QUZ0 Cluster: Chromosome chr16 scaffold_182,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_182, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 751
Score = 85.7 bits (43), Expect = 7e-16
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 310 aattccctcgtttgcaagcgctggctcaatctccagggtcgccttgttcgctcaatcagg 369
|||||||||||||||||||||||| | |||||||| || || | |||||||| | | |
Sbjct: 379 aattccctcgtttgcaagcgctggttgaatctccatggccgtttggttcgctcgctgaag 438
Query: 370 atcctggactggaacttcctcttatctggtagattgattcacaggttccctaatctcaac 429
|| ||||| ||||||||| | | |||||||| |||| |||||| ||||| |||||||
Sbjct: 439 atactggattggaacttcgtttcctctggtaggttgactcacagattccccaatctcacg 498
Query: 430 catgttgatttggttcctg 448
|| ||||||||||||||||
Sbjct: 499 cacgttgatttggttcctg 517